Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 98.7 7e-16
seq4400 91.5 1e-13
seq11706 87.8 1e-12
>seq7134
Length=91468
Score = 98.7 bits (108), Expect = 7e-16
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || || || || ||||| || || || || |||
Sbjct 86987 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87046
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | ||||| || || | || ||||| ||
Sbjct 87047 GACACCATCGAGAATGTCAAGGCCAAGA-TCCAAGACAAGGAGGGCATCCCCCCAGACCA 87105
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||| ||||| |||||||||| |||||| | || |||||
Sbjct 87106 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTACAA 87165
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 87166 CATCCAGAAAGAGTCCAC 87183
Score = 96.9 bits (106), Expect = 2e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669
||||||||| ||||| ||||| | || || || || ||||| || || || || |||
Sbjct 86302 AATGCAGATCTTCGTAAAAACGTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAG 86361
Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || | | || || || || ||||| || | || ||||| ||
Sbjct 86362 TGACACCATCGAGAACGTCAAGGGGAAGATCCAAGAAAAAGAGGGCATCCCCCCAGACCA 86421
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||| ||||| |||||||||| |||||| | || |||||
Sbjct 86422 GCAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGACGGCCGCACTCTGTCTGACTACAA 86481
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || |||||||||||
Sbjct 86482 CATCCAGAAAGAGTCCAC 86499
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||| | || || || || ||||| || || || || |||
Sbjct 87215 ATGCAGATCTTCGTGAAGACCTTGACCGGTAAGACCATCACCCTGGAGGTGGAGCCCAGT 87274
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | ||| || || || | || ||||| ||
Sbjct 87275 GACACCATCGAGAATGTCAAGGCCAAGA-TCCATGATAAGGAGGGCATCCCCCCAGACCA 87333
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | | || |||||||| || || |||||||| | ||||||| | || |||||
Sbjct 87334 GCAGAGGCTGATCTTTGCCGGGAAGCAGCTGGAAGATGGACGCACTCTGTCTGACTACAA 87393
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| || ||||||||||| || || || || | | ||| | |||||
Sbjct 87394 CATCCAGAAAGAGTCCACCTTGCACTTGGTCCTCCGCTTGAGGGGAGG 87441
>seq4400
Length=129001
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||| ||||| || |||||||| || || || ||||| || || || || ||
Sbjct 39894 AAAATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 39953
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727
| || || | || | | || || || || |||||||| | || || ||
Sbjct 39954 AGCGATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGAC 40013
Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787
|| ||| | | || ||||| ||||| || ||||| || | |||||| | |||||||
Sbjct 40014 CAGCAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTAC 40073
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || |||||||| ||
Sbjct 40074 AACATCCAGAAAGAGTCGAC 40093
Score = 89.7 bits (98), Expect = 3e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| || || || || |||
Sbjct 40353 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40412
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || || || |||||||| | || ||||| ||
Sbjct 40413 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCAGACCAG 40472
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||| || ||||| || | |||||| | ||||||||||
Sbjct 40473 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40532
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 40533 ATCCAGAAAGAGTCGAC 40549
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||| || || || || |||
Sbjct 40125 ATGCAGATCTTCGTGAAGACCCTCACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGC 40184
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|| || | || | | || || || || |||||||| | || || || ||
Sbjct 40185 GATACCATCGAGAACGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCTCCCGACCAG 40244
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||| | | || ||||| ||||| || ||||| || | |||||| | ||||||||||
Sbjct 40245 CAGAGGCTCATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTCTCCGATTACAAC 40304
Query 23791 ATACAAAAAGAGTCCAC 23807
|| || |||||||| ||
Sbjct 40305 ATCCAGAAAGAGTCGAC 40321
>seq11706
Length=58367
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/201 (70%), Gaps = 5/201 (2%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||||||| | |||||||| || || || || ||||||||||| ||||| ||
Sbjct 34543 AAGATGCAGATTTTCATGAAAACCCTTACCGGGAAGACCATCACTCTCGAGGTTGAACCC 34602
Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA- 23726
|||||| ||||| | ||||| || ||| || || ||||| | || || |
Sbjct 34603 TTGGACACAACAGAAATGTAAAAAC-CAAGATTCAGGATAAGGAAGGAATTCCTCCTAAA 34661
Query 23727 ---TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGA 23783
| || | | | || ||||| ||||| | |||||||| | || ||||| ||
Sbjct 34662 CAGTGAAGACTGACTGATCTTTGCTGGCAATTAGCTGGAAGATGGACATACTTTGTCTGA 34721
Query 23784 TTACAACATACAAAAAGAGTC 23804
|||||||| ||||| |||||
Sbjct 34722 CTACAACATTCAAAAGGAGTC 34742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337627426488176
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |