Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 132 1e-25
seq8247 109 1e-18
seq18284 104 6e-17
seq15764 104 6e-17
seq25153 100 7e-16
seq66 100 7e-16
seq451 93.3 1e-13
seq5684 86.0 1e-11
seq1066 86.0 1e-11
seq12751 84.2 5e-11
>seq7134
Length=91468
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| || || |||| ||||| || | || ||| | || ||
Sbjct 86743 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 86684
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||||||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 86683 TTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 86624
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||
Sbjct 86623 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 86564
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || || | ||| | |||||
Sbjct 86563 CTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86531
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| || || |||| ||||| || | || ||| | || ||
Sbjct 86971 CAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 86912
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||||||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 86911 TTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 86852
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||
Sbjct 86851 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 86792
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || || | ||| | |||||
Sbjct 86791 CTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86759
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| ||||| |||| ||||| || | || ||| | || ||
Sbjct 87199 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 87140
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || ||||||||
Sbjct 87139 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 87080
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||
Sbjct 87079 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 87020
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||| || ||||| || || | ||| | |||||
Sbjct 87019 CTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86987
Score = 129 bits (142), Expect = 1e-24
Identities = 157/214 (73%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560
|||||| ||||| || ||||| ||||| |||| ||||| || | || ||| | || ||
Sbjct 86515 CAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGGCCGTC 86456
Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620
||| ||||| ||||| || ||||| | | || ||||| || || || || || || ||
Sbjct 86455 TTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCTTTTTC 86396
Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680
||||||||| ||| || ||||||||||| || ||||| || | ||||| ||
Sbjct 86395 TTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 86336
Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
||| || ||||| ||||||| ||| | ||||||
Sbjct 86335 CTTACCGGTCAACGTTTTTACGAAGATCTGCATT 86302
Score = 125 bits (138), Expect = 2e-23
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||| | ||||| ||||| |||| ||||| || | || ||| | ||||||
Sbjct 87426 AGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATCT 87367
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||||||||| || ||||| || | || ||||| || || || || ||||| ||
Sbjct 87366 TCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCA 87307
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || ||||| || | ||||| |||
Sbjct 87306 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 87247
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || ||||| || || | ||| | |||||
Sbjct 87246 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 87215
>seq8247
Length=187595
Score = 109 bits (120), Expect = 1e-18
Identities = 87/105 (83%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
|||||| || ||||||||||| || || ||||||||||| ||||| ||||||||||||||
Sbjct 157056 GAATATCTGTCCATCAGTAATCGAAATTACATTTGTAGGAATATATGCAGAAACATCACC 157115
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACC 4574
| || ||||||| || ||| | ||||| | ||||||||||||
Sbjct 157116 AGACTGAGTTTCGATAATAGGAAGAGCTGTCAATGATCCACCACC 157160
>seq18284
Length=59864
Score = 104 bits (114), Expect = 6e-17
Identities = 86/105 (82%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||||||||||||||||||||||||||| ||||||| | ||||||||| |||||
Sbjct 12852 ATACTTCAGGATGACCAAAAAATCAGAATAAGTGTTGATGTAAGATAGGATCCCCTCCTT 12793
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
| | || ||||||||| | ||||| | ||| | ||| |||||||
Sbjct 12792 CGGCAGGGTCAAAAAAGGTTGTATTTAGATTGCGATCTGTTAAAA 12748
>seq15764
Length=40281
Score = 104 bits (114), Expect = 6e-17
Identities = 86/105 (82%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||||||||||||||| ||||||||||| |||||||| | ||||||||| ||||| |
Sbjct 17121 ATACTTCAGGATGACCAAAGAATCAGAATAAGTGTTGATATAAGATAGGATCCCCTCCTC 17062
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
| ||| |||||||| | ||||| | ||| | ||| |||||||
Sbjct 17061 GGGCTGGGTCAAAAAAAGTTGTATTTAGATTGCGATCTGTTAAAA 17017
>seq25153
Length=15475
Score = 100 bits (110), Expect = 7e-16
Identities = 84/103 (82%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| |||||||||||||||||||||||| || |||||||| | ||||||||| ||| | |
Sbjct 4533 ATACTTCAGGATGACCAAAAAATCAGAACAAGTGTTGATATAAGATAGGATCTCCTTCTC 4474
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
| | || ||||||||| | ||||| | ||| | ||| |||||
Sbjct 4473 CAGCAGGGTCAAAAAAGGTTGTATTTATATTGCGATCTGTTAA 4431
>seq66
Length=542294
Score = 100 bits (110), Expect = 7e-16
Identities = 136/190 (72%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | ||| | ||||| | || |||| ||||| || || ||| ||||||
Sbjct 261610 AGGACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAACAGAGTGTGTCCATCT 261669
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||||||||| ||||| | | || ||||| || || || || ||||| |||
Sbjct 261670 TCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCT 261729
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||||||||| || ||||| || | ||||| |||
Sbjct 261730 TGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 261789
Query 225682 TTGCCCGTCA 225691
|| || ||||
Sbjct 261790 TTACCGGTCA 261799
>seq451
Length=337024
Score = 93.3 bits (102), Expect = 1e-13
Identities = 123/170 (72%), Gaps = 3/170 (2%)
Strand=Plus/Minus
Query 7552 CAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATG 7611
||| |||| || || ||| | || | ||||| || || ||||| || | || |||
Sbjct 115518 CAAATTTATAAGGTAATTGTCACCACACATGCATTC---ATAATTTTTTTCATAGTGATG 115462
Query 7612 CCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGAT 7671
|| |||| || || || || ||||||||| | || || ||||| |||||||||||||||
Sbjct 115461 CCAATTATAATTGGAGGATTTGGAAATTGACTAGTGCCCTTAATAATTGGTGCTCCTGAT 115402
Query 7672 ATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTC 7721
|| || ||||| | || ||||||| |||||| |||| || || ||
Sbjct 115401 ATAGCATTTCCTCATATAAATAATATAAACTTTTGACTACTTCCCCCCTC 115352
>seq5684
Length=108592
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||| ||||| |||||||||||||||| ||||| || ||||||||||| ||||| |
Sbjct 58362 ATACTTCGGGATGCCCAAAAAATCAGAATAGGTGTTGGTATAGGATAGGATCTCCTCCTC 58303
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772
| | || |||| |||| | || || | ||| | ||| || ||||
Sbjct 58302 CGGCAGGGTCAAGAAAGGTCGTGTTTAGATTGCAATCTGTCAAAA 58258
>seq1066
Length=252923
Score = 86.0 bits (94), Expect = 1e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 4477 TGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCTGCTTGT 4536
|| |||||||| || || || ||||| || || || |||||||| ||||| || ||||||
Sbjct 80120 TGTCCATCAGTGATGGAAATGACATTCGTTGGAATGTAAGCAGACACATCGCCAGCTTGT 80061
Query 4537 GTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
||||| | || ||||| || || | || ||||||||||||
Sbjct 80060 GTTTCTATGACTGGTAAAGCAGTCAAGGAGCCACCACCAAAA 80019
Score = 84.2 bits (92), Expect = 5e-11
Identities = 82/106 (77%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 5017 CACTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATG 5076
||||||| || || || || || | || ||| ||| |||||||||||||| |||||||
Sbjct 79688 CACTTCAGTATCTGGCTCCTTATTCTGGCTGTTCTATGGGAGAATATTTTAGGGATAATG 79747
Query 5077 GTAAACATGCTTTAATCATCTACGATGATTTAAGTAAACAATTCAA 5122
| || |||||||| |||||||| || || ||| ||||| ||||
Sbjct 79748 GCAAGCATGCTTTGATCATCTATGACGACTTATCCAAACAGGTCAA 79793
>seq12751
Length=52855
Score = 84.2 bits (92), Expect = 5e-11
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727
||| ||| ||||| |||||||||||||| | |||||| || |||||||| || ||||| |
Sbjct 4536 ATACTTCGGGATGCCCAAAAAATCAGAAGAGATGTTGGTATAGGATAGGGTCTCCTCCTC 4477
Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATT 370758
| | |||||||||||| | || || | |||
Sbjct 4476 CAGCAGGATCAAAAAAGGTCGTGTTTAGATT 4446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1191113708223768
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