Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 251 6e-62
seq1625 98.7 8e-16
>seq20608
Length=25523
Score = 251 bits (278), Expect = 6e-62
Identities = 413/589 (70%), Gaps = 11/589 (2%)
Strand=Plus/Plus
Query 4548 CACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAAT 4607
|| ||||| ||||| || ||||||| ||||||||||| ||||| || ||||| || |
Sbjct 9200 CAGGCAAAGTCACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGA 9259
Query 4608 CCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAAT 4667
|| |||| | ||| || || ||||| ||||| | ||||| || |||||||||||
Sbjct 9260 CCAGGCACGAGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAG 9319
Query 4668 ATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTT 4726
|| ||||| || | ||||| ||||| | || || | | ||| ||||||||
Sbjct 9320 ATTCCTTCCACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCT-CTTTGTCTCC 9378
Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTT 4786
|||||| || ||||| | || || ||||| || | || || | | || || ||
Sbjct 9379 AATCCAAGGCAAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATT 9438
Query 4787 AAATA---ATTTACTTTTTTCAAATGG-GTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842
|| | |||| |||| || ||| ||| | ||| |||||||| || || || |||
Sbjct 9439 GAAGAGAAATTTCCTTTCTT----TGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAA 9494
Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902
||||||||||| |||| ||||| || ||||| || || || || || || |||||||
Sbjct 9495 ACATTTCAGAACGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTG 9554
Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962
| | |||||||| | | ||| | || || |||||||| |||||||| || ||||| |
Sbjct 9555 TAATCTGAACTTCTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTG 9614
Query 4963 CTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCC 5022
|||||| || |||| ||||||||||||||| || || ||| ||| || || ||
Sbjct 9615 TTGCAAAGAAAGCCAGAACATGAGATATAAAATATCTCTCCTCAAGCTCTAGGGCTTCCC 9674
Query 5023 AGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTT 5082
|||| | | || |||| | | | || || ||| | | |||||| || || ||| ||
Sbjct 9675 AGTGCTGAATGTCCTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTT 9733
Query 5083 TTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAA 5131
| || ||||| |||||||||| | || | || ||| ||||||||
Sbjct 9734 TCTTATACATCTGCCAAATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq1625
Length=211188
Score = 98.7 bits (108), Expect = 8e-16
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631
|| ||||||||||| ||||| || ||||| || | || ||||| | |||| || ||
Sbjct 134440 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCTTG 134499
Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691
||||| ||||| | ||||| || ||||||||||| || ||||| || |||||||| |||
Sbjct 134500 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGGCT 134559
Query 4692 AC 4693
||
Sbjct 134560 AC 134561
Score = 86.0 bits (94), Expect = 5e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870
||| | ||| |||||||| || || || |||||||||||||||||||| ||||| || ||
Sbjct 136423 GTCCTTAATGTAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 136482
Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915
||| || || || || || || | |||||||| | || |||||
Sbjct 136483 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGCACTTC 136527
Score = 86.0 bits (94), Expect = 5e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990
||| |||||||| |||||||| || ||||| |||||||| || |||| ||| ||||||||
Sbjct 137142 TACCAAGTTTTCATTTACTATGCCATCACTTGCTGCAAAGAAAGCCAGAACGTGAGATAT 137201
Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAG 5040
||| || || |||||||| || || |||||| | | |||||||
Sbjct 137202 AAAATATCTCTCCTCAGGCTTCAGGGCTTCCCAGTGCTGAATGTCTTTAG 137251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 426566752633076
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |