Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq41845 105 2e-18 >seq41845 Length=897 Score = 105 bits (116), Expect = 2e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 31268 CCGAGCAGTTCCAGGTTCTTCACCTTGTCCGGCCATTTGATCTTCTTGAGGATTCCGACC 31327 ||||||| ||| |||||||| |||||||| |||||||| || ||||| ||||| |||| | Sbjct 174 CCGAGCAATTCAAGGTTCTTGACCTTGTCAGGCCATTTTATTTTCTTCAGGATGCCGATC 233 Query 31328 GCCGCGCGGGAGTCGCCCTTGCCCTCGAACATCTCGGCCAGGTCGAAGCCGCTGAGGTAC 31387 | || || || || || ||||| || || |||||||||||||| ||||| Sbjct 234 ATTTCCCGATTTTCACCACGTCCTTCAAACATATCAGCAAGGTCGAAGCCGCTCAGGTAG 293 Query 31388 TGGCGCCAGGCCTTGGGCCACTGGCTCAGCGGGCGCAGGGTCAGGTCATCATTGACAATG 31447 | ||||| | ||||| | | | ||| | | | ||| |||||| | | |||| Sbjct 294 CGCCGCCATGATGCAGGCCAGTCGGAGACCGGCCTTATGCTCATGTCATCGGTCATAATG 353 Query 31448 TCCAGGAGGTCCATCTGATCGATCTCCTCCAGGCGC 31483 || || | |||||||| || || || |||||||| Sbjct 354 TCGAGAACATCCATCTGGTCTATTTCAACCAGGCGC 389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160287222026280