Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_030917.1 Length=93577 Score E Sequences producing significant alignments: (Bits) Value seq58805 102 5e-17 >seq58805 Length=408 Score = 102 bits (112), Expect = 5e-17 Identities = 267/398 (67%), Gaps = 12/398 (3%) Strand=Plus/Plus Query 78734 ACGAACACCGCGGACGTGATCCGGTTGATTATCCGAGACGAAGCAGTTCATGGGTACTAC 78793 ||||| ||||| || | ||||| |||||||||| || ||||||||||| || || || Sbjct 1 ACGAATACCGCCGATCTTATCCGCCTGATTATCCGGGATGAAGCAGTTCACGGCTATTAT 60 Query 78794 ATCGGATACAAGTACCAGCGAGGCCTCGAGACCCAGG--GGCCGGCGCGGCAGGCTGAGC 78851 ||||| || || | ||||| | ||| | | | | | ||| | || Sbjct 61 ATCGGCTATAAATTTCAGCGTTCATTACAGAATTATGACGAACAAACCCGCAAG--GAAA 118 Query 78852 TCAAGGAGTACACGTTCGATCTGCTCTCGGAGCTCTACGACAACGA-GT--GTGACTACA 78908 | ||||| | || ||| |||| | | || | ||||| || || || || | ||| Sbjct 119 TAAAGGAATTTACCTTCAGTCTGTTATTTGATTTATACGAGAATGAAGTCAGTTA-TACG 177 Query 78909 CCGAGCAGCTCTATGACGACGTCGGACTCACCGAGGATGTCAAGAAGTTCCTGCGCTACA 78968 | || | | ||||||| | |||| | |||||||| | || ||||||| || | Sbjct 178 CGGA--AATTATATGACGGTGCCGGATGGTCTGAGGATGTGATTAAATTCCTGCATTATA 235 Query 78969 ACGGCAACAAGGCGCTGATGAACCTCGGCTACGAAGCACTGTTCCCCAAGGAAGAGAC-C 79027 | | ||| || || ||||||||| | ||||| ||||||||||| || || | ||| Sbjct 236 ATGCCAATAAAGCACTGATGAACTTAGGCTATGAAGCACTGTTTCCGGAGAGTGTGACGG 295 Query 79028 ATGGCAGACCCGGCCATCATGTCCGCGCTCTCACCAGGCGGCGACGAGAACCACGACTTC 79087 ||| ||| ||||| || | || ||||| ||||| | | | ||||||| ||||| ||| Sbjct 296 ATGTCAG-TCCGGCAATATTATCGGCGCTGTCACCGGATGCCAACGAGAATCACGATTTC 354 Query 79088 TTCTCCGGGTCGGGCTCGAGCTACGTCATCGGCAAAGC 79125 || ||||| || || || || || || || ||||| Sbjct 355 TTTTCCGGATCCGGATCTTCTTATGTGATAGGTAAAGC 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 298983169413896