Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 358 9e-94
seq2665 123 3e-23
seq1625 120 4e-22
seq7358 87.8 2e-12
>seq20608
Length=25523
Score = 358 bits (396), Expect = 9e-94
Identities = 644/935 (69%), Gaps = 11/935 (1%)
Strand=Plus/Plus
Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTTT 47851
||| |||||| |||| || | |||| ||| ||| | | |||| ||||| || |
Sbjct 8851 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTTGACACCACTCCTATCCT 8910
Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911
||| | || || | ||||| || || ||||| || |||||| || ||| | ||
Sbjct 8911 CCTATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCACTTCCAGGGAGATAGTCTC 8970
Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAG 47971
|||||| ||||| ||||| || | || ||| || |||| | | || || ||
Sbjct 8971 CATAAAGTCAAAAGGATTTTCTACTCTAAAAACCTTGCTAAAATCCAGCTCCAGCATAAG 9030
Query 47972 TCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTT 48031
||| ||||| |||||||| ||||| ||||| | |||||||| || | || ||
Sbjct 9031 TCTGTCTGCCACGAATTCAATATACTACTTCATTAAAGTACAATTCACCCCAGTGAGCTT 9090
Query 48032 AACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGA 48091
||||| | ||||| || || ||||| ||||| || | |||| || | || ||
Sbjct 9091 TACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTAACAGAATTGATGATGATTTC 9150
Query 48092 TGTTACCGTTTCCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATC 48151
| | || | ||| ||| | || || ||||||||||| || ||||| ||
Sbjct 9151 TTTCACTCTCGGCTCCAAAGGTTTGTGCAGCAGGTGTTTAAACATCGGGCAGGCAAAGTC 9210
Query 48152 ACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAG 48211
||| || | ||||| |||||| ||||| | ||| || |||||||||||||| |||| ||
Sbjct 9211 ACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCACGAG 9270
Query 48212 TCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTAC 48271
||| | || |||||||| ||||||| || ||||| ||||||||||| || ||||| ||
Sbjct 9271 TCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCAC 9330
Query 48272 GGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTG 48328
| ||||| || | | ||||| | | || || |||| | ||||| |
Sbjct 9331 CGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTCCAATCCAAGGCAA 9390
Query 48329 TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtt 48388
|||||||| |||||||||||||||| |||||| | || || ||||| |||||||| ||
Sbjct 9391 AGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATTGAAGAGAAATTT 9450
Query 48389 tttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAAT 48448
|||| ||| || |||| |||||| || || | |||||| ||||||| || | ||
Sbjct 9451 CCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAAACATTTCAGAACGTAT 9510
Query 48449 ATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGT 48508
||||| || || || || || || || ||||| |||||||| ||||| || ||
Sbjct 9511 GTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAATCTGAACTTCTTG 9570
Query 48509 ACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAA 48568
| ||| | || |||| || ||||||||||| |||||||| | ||||| || || |
Sbjct 9571 GCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTGCAAAGAAAGCCAG 9630
Query 48569 TACATGTTTAATAAAATATTTTTCGTTGGAAG-TC-AGTTTATTCCAGTCATTGATATCT 48626
||||| ||||||||| | || | ||| || || | ||||| | || ||
Sbjct 9631 AACATGAGATATAAAATATCTCTCCT--CAAGCTCTAGGGCTTCCCAGTGCTGAATGTCC 9688
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| || | | | || || ||||||| |||||| || ||||| ||| |||||||| | |
Sbjct 9689 TTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTTTCTTATACATCTGC 9747
Query 48687 CATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|| |||||| ||||| ||| | || || |||||
Sbjct 9748 CAAATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq2665
Length=168205
Score = 123 bits (136), Expect = 3e-23
Identities = 107/133 (80%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186
||||||||||| |||| ||||| ||||| || ||||| |||||||| ||||| | ||
Sbjct 80470 TGAAATTCTCCTGACAGGACTCTGCGAGTATAGATATTGCTGGTATAAGGTTCAATGGAC 80529
Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246
||||| ||||||| ||| |||||||| |||||||| ||||| || || | | ||||||
Sbjct 80530 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 80589
Query 77247 TTTCTGAGACCAT 77259
||||| | |||||
Sbjct 80590 TTTCTTATACCAT 80602
Score = 98.7 bits (108), Expect = 1e-15
Identities = 107/142 (75%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
||| || ||||| || | || ||||| ||||| |||||||| || || ||||| || ||
Sbjct 95630 AGTACCAGCATTGAAGAGGGTGGGAGAGGCATGGGTAAACCACTTCTCGGAAAGAAGGTT 95689
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
|||||||||||||| | || || | || ||||| || || | || | ||||||
Sbjct 95690 ATATGTTTCAATAGCAGCATCAATACCTTCTTTGTGAATCCCCACAGAAACCCTCATCAA 95749
Query 78518 CATATGCTGAGGTCTTTCAACC 78539
||||||||| ||||||||| ||
Sbjct 95750 CATATGCTGTGGTCTTTCAGCC 95771
Score = 93.3 bits (102), Expect = 6e-14
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||||||||| |||||||| || ||||| ||||||| || || || | | | |||
Sbjct 89090 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGGTCCCTAGCACGCTGT 89149
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
||||| |||||||| ||||| || | ||| || ||||| | || || ||||||| ||
Sbjct 89150 TCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 89209
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151
|| || || || || | | ||||||||
Sbjct 89210 TCCAGGTAAATAGCAAATGCCCCAGGTCG 89238
Score = 86.0 bits (94), Expect = 9e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974
||||||| |||||||| ||||||||||| ||||||| ||||| || |||||||| ||
Sbjct 88657 ATATAGCTTCTCAAATTCCTCTCCCCAAACTTCATCCAGACCAGGACACTCATTTGGACA 88716
Query 77975 CATCAATGACCAGTC 77989
|||||| ||||||||
Sbjct 88717 CATCAAAGACCAGTC 88731
>seq1625
Length=211188
Score = 120 bits (132), Expect = 4e-22
Identities = 98/119 (82%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224
|||||||| ||||| | ||| || |||||||||||||| ||||| ||||| ||||| |||
Sbjct 134440 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCTTG 134499
Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283
||||| ||||| | || ||||| ||||||||||| || ||||| || || ||||| ||
Sbjct 134500 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGGC 134558
>seq7358
Length=89575
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697
||| ||||| |||||||| || ||||||| ||| ||||||||||| ||||| |||||
Sbjct 43520 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCGGG 43579
Query 48698 GTATTGGATTGGGAAAATAACAAATC 48723
||| |||||||| || || |||||||
Sbjct 43580 GTACTGGATTGGAAAGATGACAAATC 43605
Score = 84.2 bits (92), Expect = 3e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582
||||||| ||||| || ||||||||||| || ||||| || ||||| | ||| |||||
Sbjct 39775 CCAAATTTTCATTCACAATTCCATCACTGGCGGCAAAGAAAGCTAAGATATGAGAAATAA 39834
Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATA 48633
||||||| || | || | || || ||||||| | || ||| |||||||
Sbjct 39835 AATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATA 39885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693863227326080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |