Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq20608 343 2e-89
seq2665 127 3e-24
seq7358 114 2e-20
seq1625 113 6e-20
>seq20608
Length=25523
Score = 343 bits (380), Expect = 2e-89
Identities = 643/936 (69%), Gaps = 13/936 (1%)
Strand=Plus/Plus
Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTTT 46340
||| ||||| |||| || | |||| ||| ||| | | ||||| ||||| || |
Sbjct 8851 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTTGACACCACTCCTATCCT 8910
Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400
|| | ||||| | ||||| || || ||||| || |||||| || ||| | ||
Sbjct 8911 CCTATACTTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCACTTCCAGGGAGATAGTCTC 8970
Query 46401 CATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAG 46460
|||||| ||||| ||||| || || ||| || |||| | | || || ||
Sbjct 8971 CATAAAGTCAAAAGGATTTTCTACTCTAAAAACCTTGCTAAAATCCAGCTCCAGCATAAG 9030
Query 46461 TCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTT 46520
||| ||||| |||||||| |||||| ||||| | |||||||| || |||| ||
Sbjct 9031 TCTGTCTGCCACGAATTCAATATACTACTTCATTAAAGTACAATTCACCCCAGTGAGCTT 9090
Query 46521 GACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGAT-ATTATCG 46579
|| || | ||||| || || ||||| ||||| || | |||| || ||| || ||
Sbjct 9091 TACTGGCAAGGCCTCTGTGAGGAACTCCTGTTCTATCCTAACAGAATT-GATGATGATTT 9149
Query 46580 ATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAAT 46639
| | ||| | ||| ||| |||| || ||||||||||| || ||||| |
Sbjct 9150 CTTTCACTCTCGGCTCCAAAGGTTTGTGCAGCAGGTGTTTAAACATCGGGCAGGCAAAGT 9209
Query 46640 CACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTA 46699
|||| || | |||| |||||| ||||| | ||| || ||||||||||| ||||||| |
Sbjct 9210 CACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCACGA 9269
Query 46700 GTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTA 46759
|||| | || |||||||| ||||| | || ||||| ||||||||||| || ||||| |
Sbjct 9270 GTCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCA 9329
Query 46760 CAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTT 46816
| | || || || || | | ||||| | | || || || | ||||||
Sbjct 9330 CCGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTCCAATCCAAGGCA 9389
Query 46817 GAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGt 46876
||||||||| ||||| |||||||||| |||||| | || || ||||| |||||||| |
Sbjct 9390 AAGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATTGAAGAGAAATT 9449
Query 46877 ttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAA 46936
| |||| | || |||| || || || || | |||||| ||||||| ||| | |
Sbjct 9450 TCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAAACATTTCAGAACGTA 9509
Query 46937 TGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTG 46996
||||||| || || || || || || || ||||| ||||| |||||||| || |||
Sbjct 9510 TGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAATCTGAACTTCTT 9569
Query 46997 TACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCA 47056
| ||| | || ||| || ||||| ||||| |||||||| | ||||| || ||||
Sbjct 9570 GGCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTGCAAAGAAAGCCA 9629
Query 47057 ATACATGTTTAATAAAATATTTTTCATCGGTAG-TC-AGTTTATTCCAGTCATTGATATC 47114
||||| ||||||||| | || || || || || | ||||| | || ||
Sbjct 9630 GAACATGAGATATAAAATATCTCTCCTC--AAGCTCTAGGGCTTCCCAGTGCTGAATGTC 9687
Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174
|| || | | | || || ||||||| ||| || || ||||| ||| |||||||| |
Sbjct 9688 CTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTTTCTTATACATCTG 9746
Query 47175 CCATATATCACGATATTGGATCGGAAAAATAACAAA 47210
||| |||||| | |||| ||| |||| || |||||
Sbjct 9747 CCAAATATCATGGTATTCGATAAGAAAGATGACAAA 9782
>seq2665
Length=168205
Score = 127 bits (140), Expect = 3e-24
Identities = 108/133 (81%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781
||||||||||| |||| ||||| ||||| || ||||| |||||||| ||||| | ||
Sbjct 80470 TGAAATTCTCCTGACAGGACTCTGCGAGTATAGATATTGCTGGTATAAGGTTCAATGGAC 80529
Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841
||||| ||||||| ||| ||||||||||||||||| ||||| || || | | ||||||
Sbjct 80530 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATAAGTAAACTG 80589
Query 75842 TTTCTGAGACCAT 75854
||||| | |||||
Sbjct 80590 TTTCTTATACCAT 80602
Score = 111 bits (122), Expect = 2e-19
Identities = 124/166 (75%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398
|| || | ||| |||||||| ||||| | || || || || || || || || || ||
Sbjct 99858 CTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCTTGCTGCCAGGATG 99917
Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458
||||||||||| || | |||||| |||| || ||| |||| || || |||||||||| |
Sbjct 99918 GCATAGTCAGGGTGCTTTGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 99977
Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504
|| | ||| || || || | |||| || ||||| ||||||||||
Sbjct 99978 TCCACAGTGGTGACCCCACTGTATAAGCCCTGAATTACTTTCATGG 100023
Score = 96.9 bits (106), Expect = 5e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
||| || ||||| || | || ||||| ||||| || ||||| || || ||||| || ||
Sbjct 95630 AGTACCAGCATTGAAGAGGGTGGGAGAGGCATGGGTAAACCACTTCTCGGAAAGAAGGTT 95689
Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112
|||||||||||| | || || ||| | || ||||| || |||| || | ||||||
Sbjct 95690 ATATGTTTCAATAGCAGCATCAATACCTTCTTTGTGAATCCCCACAGAAACCCTCATCAA 95749
Query 77113 CATATGCTGAGGTCGTTC 77130
||||||||| |||| |||
Sbjct 95750 CATATGCTGTGGTCTTTC 95767
Score = 87.8 bits (96), Expect = 3e-12
Identities = 118/162 (73%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT- 76044
|| ||||| || || || || || || || |||||||| ||||| || || | ||||||
Sbjct 84590 GCCAGTTCACAGCTGGCTTCCAAGGCTCCATAATAAATGGTTTCAAAGATTTGCTTATTC 84649
Query 76045 AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAG 76104
|| | || | || || |||| ||||||||||| | |||||||| |||||||| ||
Sbjct 84650 AATAACTGG-GCCTCTGGACTTTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAG 84708
Query 76105 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146
|| || || ||||| ||||| || | || | ||||| ||
Sbjct 84709 ACCTTGTACCCCAATTCCAATGGGGCGGTGGCGTTTATTTGA 84750
Score = 86.0 bits (94), Expect = 9e-12
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579
|||||||| ||||||||||| ||||||| ||||||||| ||||| ||||||||||| |||
Sbjct 88667 TCAAATTCCTCTCCCCAAACTTCATCCAGACCAGGACACTCATTTGGACACATCAAAGAC 88726
Query 76580 CACTC 76584
|| ||
Sbjct 88727 CAGTC 88731
>seq7358
Length=89575
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711
|||||||||| || || | ||| || ||||| ||||| |||||||| || || | || |
Sbjct 30050 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 30109
Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771
| ||||| |||||||| || |||||||| || ||||| || ||||||||||| || || |
Sbjct 30110 TTAGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAATTCCTTCTACAGCAGCAAAAG 30169
Query 46772 CGACAAGTCTCTCTCC 46787
| || | ||| |||||
Sbjct 30170 CCACCACTCTTTCTCC 30185
Score = 87.8 bits (96), Expect = 3e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACG 47186
||| ||||| ||||||||||| || |||| ||| ||||||||||| ||||| ||||| |
Sbjct 43520 TACCTCTTCTGCTGTCCAGAAGGATGCCTGTGCCTTTTTATACATTTTCCAAATATCGGG 43579
Query 47187 ATATTGGATCGGAAAAATAACAAATC 47212
|| ||||| ||||| || |||||||
Sbjct 43580 GTACTGGATTGGAAAGATGACAAATC 43605
Score = 86.0 bits (94), Expect = 9e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072
|||||| |||||||| ||||||||||| || ||||| || || || | ||| ||||||
Sbjct 39776 CAAATTTTCATTCACAATTCCATCACTGGCGGCAAAGAAAGCTAAGATATGAGAAATAAA 39835
Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATA 47122
|||||| ||||| | | || || ||||||| | || ||| |||||||
Sbjct 39836 ATATTTCTCATCTGATTTAAGCTTGTTCCAGTGAGGGAGATCCTTTGATA 39885
>seq1625
Length=211188
Score = 113 bits (124), Expect = 6e-20
Identities = 98/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713
|||||||| ||||| | ||| || ||||||||||| |||||||| ||||| || || |||
Sbjct 134440 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGACCAGGCATGAGTCCTCGTTTCTTG 134499
Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773
||||| ||||| | || ||||| ||||||||||| || ||||| || || || || ||
Sbjct 134500 AGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACCGCGGCAAAGGCT 134559
Query 46774 AC 46775
||
Sbjct 134560 AC 134561
Score = 89.7 bits (98), Expect = 7e-13
Identities = 103/138 (75%), Gaps = 3/138 (2%)
Strand=Plus/Plus
Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATCTTCTTGT---GACATAACTCCCATTTT 46340
||| ||||| |||| || | |||| ||| ||| | | ||||| |||||||| |
Sbjct 132994 TTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGGCTCGACATCACTCCCATCCT 133053
Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400
|| || || ||||| | ||||| || || ||||| || ||||||| ||| ||||| ||
Sbjct 133054 CTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAGATATTCTC 133113
Query 46401 CATAAAATCAAACGGATT 46418
|||||| |||||||||||
Sbjct 133114 CATAAAGTCAAACGGATT 133131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712107645623040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |