Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 125 2e-23
seq4400 122 2e-22
seq66 89.7 1e-12
>seq7134
Length=91468
Score = 125 bits (138), Expect = 2e-23
Identities = 163/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || |||||||| ||||||||||| || | | |||
Sbjct 87207 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTG 87148
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || ||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 87147 CGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 87088
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 87087 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 87031
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || | ||||||||||||| ||||||
Sbjct 87030 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86987
Score = 116 bits (128), Expect = 9e-21
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || ||||| || ||||||||||| || | | |||
Sbjct 86751 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTG 86692
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || ||||| || |||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 86691 CGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 86632
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 86631 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 86575
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || | ||||||||||||| ||||||
Sbjct 86574 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86531
Score = 116 bits (128), Expect = 9e-21
Identities = 161/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || ||||| || ||||||||||| || | | |||
Sbjct 86979 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTG 86920
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || ||||| || |||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 86919 CGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 86860
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
||||| ||||| || || |||||| |||| | | |||| ||| ||| || ||
Sbjct 86859 TCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCC 86803
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || || || | ||||||||||||| ||||||
Sbjct 86802 AGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86759
Score = 116 bits (128), Expect = 9e-21
Identities = 156/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | || | || |||||||| ||||||||||| || | | ||| | |||||
Sbjct 87427 GAGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATC 87368
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || |||||||| ||||| |||||||||||||| | | ||| || ||||| ||
Sbjct 87367 TTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 87308
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAAT 152068
|| || || |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 87307 ATGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGAT 87251
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || | ||||||||||||| ||||||
Sbjct 87250 GGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 87215
Score = 114 bits (126), Expect = 3e-20
Identities = 161/225 (72%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | ||||| || || || || |||||||| ||||||||||| || | | |||
Sbjct 86523 CTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTG 86464
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || ||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 86463 CGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCC 86404
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCA 152060
|| |||||||| || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 86403 TCTTTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCC 86347
Query 152061 AGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || || || || || | || || ||||||| |||||||
Sbjct 86346 AGGGTGATGGTCTTACCGGTCAACGTTTTTACGAAGATCTGCATT 86302
>seq4400
Length=129001
Score = 122 bits (134), Expect = 2e-22
Identities = 162/225 (72%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| || || || || || |||||||| |||||||||||||||| | |||
Sbjct 40118 CCTCAGACGGAGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGT 40059
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || || ||||| |||||||||||||| | | ||| ||
Sbjct 40058 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCC 39999
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||| || || || || || || || |||| | | | || ||| || || ||
Sbjct 39998 TTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAG 39939
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| || || ||||| ||||| ||||||||||||| |||||||||
Sbjct 39938 GGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATTTT 39894
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
||| || | ||| || || || || || |||||||| |||||||||||||||| | |||
Sbjct 40346 CCTCAGACGGAGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGT 40287
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||| || || || || || ||||| |||||||||||||| | | ||| ||
Sbjct 40286 GCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGGGATGCC 40227
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAG 152062
||| || || || || || || || |||| | | | || ||| || || ||
Sbjct 40226 TTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAG 40167
Query 152063 AGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || ||||| ||||| ||||||||||||| ||||||
Sbjct 40166 GGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40125
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || || || || || |||||||| |||||||||||||||| | ||| | |||||
Sbjct 40564 AGCACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAGAGAGTGCGGCCATCC 40505
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||||||||||||| | | ||| ||||| || ||
Sbjct 40504 TCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCC 40445
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || || |||| | | | || ||| || || || || || ||
Sbjct 40444 TGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACCTCCAGGGTGATGGTC 40385
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||||||||||| ||||||
Sbjct 40384 TTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40353
>seq66
Length=542294
Score = 89.7 bits (98), Expect = 1e-12
Identities = 150/216 (69%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | |||| || |||| || ||||||||||| || | ||| |||||
Sbjct 261609 GAGGACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAACAGAGTGTGTCCATC 261668
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| | ||||| || ||||| | |||||||||||| | | ||| || ||||| ||
Sbjct 261669 TTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTATC 261728
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAAT 152068
||| || || |||||| | || | | |||| ||| ||| || || || || ||
Sbjct 261729 TTGGATCTTGGCCTTGACATTGTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGAT 261785
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || || |||||||| |||| ||||||
Sbjct 261786 GGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 261821
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1152449321002012
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