Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq7134 168 1e-36 seq66 127 4e-24 seq4400 120 6e-22 seq34498 111 3e-19 seq7041 96.9 7e-15 seq6582 93.3 9e-14 seq15599 89.7 1e-12 seq12518 89.7 1e-12 seq12135 89.7 1e-12 seq11706 87.8 4e-12 >seq7134 Length=91468 Score = 168 bits (186), Expect = 1e-36 Identities = 168/218 (77%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || || ||||| || | ||| ||||| |||||||||||||||| || |||||| Sbjct 87204 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGG 87145 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 || || || || |||||||||||||||||||| | || ||||| || || |||||| Sbjct 87144 CCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 87085 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||||||||| || || || | ||||| ||||| | || || || || ||| Sbjct 87084 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 87025 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| ||||| ||||| |||||||| Sbjct 87024 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86987 Score = 159 bits (176), Expect = 7e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || || ||||| || | ||| || || |||||||||||||||| || |||||| Sbjct 86748 AGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGG 86689 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 || || || || || ||||||||||||||||| | || ||||| || || |||||| Sbjct 86688 CCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 86629 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||||||||| || || || | ||||| ||||| | || || || || ||| Sbjct 86628 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 86569 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| ||||| ||||| |||||||| Sbjct 86568 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86531 Score = 159 bits (176), Expect = 7e-34 Identities = 166/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || || ||||| || | ||| || || |||||||||||||||| || |||||| Sbjct 86976 AGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGAGTGCGG 86917 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 || || || || || ||||||||||||||||| | || ||||| || || |||||| Sbjct 86916 CCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCC 86857 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 |||||||||||||| || || || | ||||| ||||| | || || || || ||| Sbjct 86856 TTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 86797 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| ||||| ||||| |||||||| Sbjct 86796 ATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 86759 Score = 158 bits (174), Expect = 3e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 282882 AGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGG 282941 || || || ||||| || | ||| ||||| |||||||||||||||| || |||||| Sbjct 86520 AGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGG 86461 Query 282942 CCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCC 283001 || || || || |||||||||||||||||||| | || ||||| || || ||||| Sbjct 86460 CCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCT 86401 Query 283002 TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTG 283061 || ||||||||||| | || ||| | ||||| ||||| | || || || || ||| Sbjct 86400 TTTTCTTGGATCTTCCCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 86341 Query 283062 ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACAA 283111 || |||||||| ||||| || || ||||| ||||||||| || | || || Sbjct 86340 ATGGTCTTACCGGTCAACGTTTTTACGAAGATCTGCATTGTCTTTTAAAA 86291 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | || ||| || |||| || || ||| ||||| |||||||||||||||| Sbjct 87442 ACCTCCCCTCAAGCGGAGGACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGA 87383 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| ||||| || || || |||||||||||||||| | || ||||| || Sbjct 87382 CAGAGTGCGTCCATCTTCCAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGG 87323 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| || || || | ||||| ||||| | || || Sbjct 87322 GATGCCCTCCTTATCATGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 87263 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 87262 CTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 87215 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 77647 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 77705 >seq66 Length=542294 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| || | || ||| || |||| || || ||| | || ||||||||||||||| Sbjct 261594 ACCTCCCCTCAAGCGGAGGACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAA 261653 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||| | ||||| || | || ||||| ||||||||||| | || ||||| || Sbjct 261654 CAGAGTGTGTCCATCTTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGG 261713 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| ||||||||||| || || || | ||||| ||||| | || || Sbjct 261714 GATGCCCTCCTTATCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCACTGGGCTCCAC 261773 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| |||||||| |||| ||||| || || |||||||| Sbjct 261774 CTCCAGGGTGATGGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 261821 >seq4400 Length=129001 Score = 120 bits (132), Expect = 6e-22 Identities = 170/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || || || || | || ||||| ||||||||||| || | Sbjct 40124 ACCACCCCTCAGACGGAGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGA 40065 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | | || ||||| || Sbjct 40064 GAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGG 40005 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || || || |||||||| || || ||| | ||||| || || | || || Sbjct 40004 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCAC 39945 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTCATATACA 283110 || || ||||| ||||| || || | ||||| ||||| ||||||||||| | |||| Sbjct 39944 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCATTTTGACCTACA 39886 Score = 116 bits (128), Expect = 8e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || ||||| || | || ||||| ||||||||||| || | Sbjct 40579 CCACCCCTCAGACGCAGCACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAG 40520 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || || |||||||| | | || ||||| || Sbjct 40519 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 40460 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || || || || |||||||| || || ||| | ||||| || || | || || Sbjct 40459 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCACC 40400 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 40399 TCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40353 Score = 114 bits (126), Expect = 3e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | ||| || || || || || | || ||||| ||||||||||| || | Sbjct 40352 ACCACCCCTCAGACGGAGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGA 40293 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || || |||||||| | | || ||||| || Sbjct 40292 GAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGGAGG 40233 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || || || || |||||||| || || ||| | ||||| || || | || || Sbjct 40232 GATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTATCGCTGGGCTCCAC 40173 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 40172 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40125 >seq34498 Length=9444 Score = 111 bits (122), Expect = 3e-19 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 43975 CGGATTTGCCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACA 44034 || || | ||| || || ||||||||| |||| || ||||| |||||| | || || | Sbjct 8441 CGCATATACCAGGCCTCTACATCGGAGCTGTATGGTAAGGTGCAGGAGGTGCCACAGAGT 8382 Query 44035 GAAAGGACTCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGG 44094 |||| || || ||||||||||| ||| |||| ||||||||||| |||| | |||| Sbjct 8381 GAAACTACCCCTTTTTATCCCCGTTCTCCCTATGCTGTGGCGAAGCAGTATGGTTTTTGG 8322 Query 44095 ATTTGTAAAAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATT-TGTTTCAA 44153 ||| |||||| || || ||| || |||||||| | | ||| ||| ||||| || Sbjct 8321 ATTACTAAAAACTACCGAGAGAGTTACGGGATGTTTGCTGTGAATGGTATTCTGTTT-AA 8263 Query 44154 TCACGAAAGT 44163 ||||||||| Sbjct 8262 CCACGAAAGT 8253 >seq7041 Length=99228 Score = 96.9 bits (106), Expect = 7e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 282876 CCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGC 282935 || ||| |||||| |||| || | ||| | || || || ||||||| | || Sbjct 76606 CCCCGCGAGCGAAGCACCAAGTGCAGGGTGGACTTTTCCTGAATCCTGTAGTCTGAGAGA 76547 Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 |||||||||||||||| |||| || ||||| |||| || || | |||| || || Sbjct 76546 GTGCGGCCATCCTCTATCCGTTTGCCTGCAAAAATCAGACACTGCTAGTCAGGTGGGATG 76487 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC-CGAAGCTTCGACTTC 283054 || |||||||||||||| || | ||| || | || | ||||| | ||||| || || Sbjct 76486 CCTTCCTTGTCTTGGATTTTAGATTTGACATTCTCAGTGGTGTCACTGAGCTT-AACCTC 76428 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || |||| ||||| || | |||||||| Sbjct 76427 AAGGGTTATGGTCTTGCCTGTCAGGGTCTTCACAGAGATCTGCAT 76383 >seq6582 Length=97331 Score = 93.3 bits (102), Expect = 9e-14 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 282881 CAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCG 282940 |||| |||| |||| || | ||| |||| ||| | |||| || | | ||||| Sbjct 93412 CAGGTGAAGCACCAAGTGCAGGGTGTACTCTTGCTGGGTATTGTCATCTGAGAAAGTGCG 93353 Query 282941 GCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTC 283000 ||||||||| || | ||| || ||||| ||| || || |||||| ||| |||| || Sbjct 93352 GCCATCCTCCAGCTTTTTGCCTGCAAAAGTCAGACACTGCTGGTCAGGCGGGATACTTTC 93293 Query 283001 CTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA--AGCTTCGACTTCGAGA 283058 |||||||||||| || |||||| | | || | ||||| | | ||||| | ||| Sbjct 93292 CTTGTCTTGGATTTTGGCTTTTCCATTCTCAGTGGTGTCTCACTGGGCTCGACCTTGAGG 93233 Query 283059 GTGATCGTCTT--ACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||||| ||||| ||||| | ||||| || ||| ||||| Sbjct 93232 GTGATGGTCTTGCACCCG--AGGGTCTTCACAAATGTCTGC 93194 >seq15599 Length=40940 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 35993 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 36051 >seq12518 Length=54009 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 35313 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 35255 >seq12135 Length=56136 Score = 89.7 bits (98), Expect = 1e-12 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 168753 TTAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCGA 168811 ||||||||||||| |||||||| ||||||||||| |||||||||||||| ||||||||| Sbjct 15920 TTAGTATAGTGGTGAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTCCCCGA 15978 >seq11706 Length=58367 Score = 87.8 bits (96), Expect = 4e-12 Identities = 139/198 (70%), Gaps = 5/198 (3%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| ||||||||||||| | || | ||||| || || | || || |||||| Sbjct 34739 TCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATCTTCCAGCTAATTGCCAGCAAAG 34680 Query 282969 ATCAAACGTTGTT----GGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTAC 283024 |||| | | || | | | ||||| || ||||| || || ||||| | |||||| Sbjct 34679 ATCAGTCAGTCTTCACTGTTTAGGAGGAATTCCTTCCTTATCCTGAATCTTGGTTTTTAC 34620 Query 283025 GGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT 283084 | || | |||||| | | ||| || ||||||||||| ||||| || || | || || Sbjct 34619 ATT-TCTGTTGTGTCCAAGGGTTCAACCTCGAGAGTGATGGTCTTCCCGGTAAGGGTTTT 34561 Query 283085 AACGAATATCTGCATTTT 283102 | ||| |||||||| || Sbjct 34560 CATGAAAATCTGCATCTT 34543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045495002608888