Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq20608 185 9e-42 seq1747 86.0 7e-12 >seq20608 Length=25523 Score = 185 bits (204), Expect = 9e-42 Identities = 377/559 (67%), Gaps = 1/559 (0%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| |||| |||| ||| || ||||| | |||||| |||||||| | Sbjct 9200 CAGGCAAAGTCACAGTGTAAACCTTTATCTCTGCTAATAAGTTCATTGGAAAATGTGAGA 9259 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 || |||| | |||| | || || | ||| ||||||| ||||| || || |||||||| Sbjct 9260 CCAGGCACGAGTCCTTGATTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAG 9319 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 || || || || | |||||||| || | |||| ||| | || || | | || | Sbjct 9320 ATTCCTTCCACCGTAGCAAAGGCTACCACACGTTCTCCACAGGTAGCCTCTTTGTCTCCA 9379 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| | ||||| |||||| ||||||| || | ||||| || || Sbjct 9380 ATCCAAGGCAAAGCCCAATCTGCCTTCTTCTTTACACGAGGCATCATCTCAATGGCATTG 9439 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||||| | |||||| || | || || || ||||| || | |||| ||||| Sbjct 9440 AAGAGAAATTTCCTTTCTTTGGAGTCCTTAATGTAAGTGTCAATGAGGAGACTAAACATT 9499 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 |||||| | || ||||| || ||||| || || ||||| ||||| ||||| | | Sbjct 9500 TCAGAACGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGAGGGCTTCTGTAATC 9559 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 ||||| || | ||| | | | || ||||| || || || |||||||| | ||| Sbjct 9560 TGAACTTCTTGGCTAAAACACTCCACCAAGTTTTCATTTACTATGCCATCACTTGTTGCA 9619 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 |||||||| ||||||| |||||||| ||| || ||| || || ||| | Sbjct 9620 AAGAAAGCCAGAACATGAGATATAAAATATCTCTCCTCAAGCTCTAGGGCTTCCCAGTGC 9679 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048 | ||| || || || | | | || || ||| ||| |||||| ||| |||| Sbjct 9680 TGAATGTCCTTAGAGAGA-CCACCTCCTCAGCTGCCCAAAAGGAAGCCTCCATTTTCTTA 9738 Query 24049 TACATTAGCCAAATATCAT 24067 ||||| |||||||||||| Sbjct 9739 TACATCTGCCAAATATCAT 9757 >seq1747 Length=204760 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8405 CTCCCGGGTTCAAGCTATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCAAA 8464 |||| ||| |||||| || ||||||||||||||||| |||||||||||| ||||||| Sbjct 59045 CTCCTGGGCTCAAGCGATCCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCG 58986 Query 8465 AGCCACCACGCC 8476 ||||||||||| Sbjct 58985 CGCCACCACGCC 58974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520883256440800