Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11]
92,772 sequences; 2,204,732,179 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq4400 156 3e-33
seq7134 149 5e-31
seq66 102 6e-17
>seq4400
Length=129001
Score = 156 bits (172), Expect = 3e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || ||||| | || ||||||||| || || ||| || |||||||||||||||| |
Sbjct 40579 CCACCCCTCAGACGCAGCACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCGGAG 40520
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| ||| | || ||||||||||| || |||||||| | | |||||| |||| |||
Sbjct 40519 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCTGGAGGG 40460
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289
| ||||| || ||| ||||| ||||| |||| | ||||| ||| || |||||
Sbjct 40459 ATGCCTTCTTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTATCGCTGGGCTCCAC 40401
Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||| || || ||||| || |||||||||||||||||||| |||||
Sbjct 40400 CTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40353
Score = 145 bits (160), Expect = 5e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | ||| ||||| || || ||| || ||||||||||||||
Sbjct 40127 CATACCACCCCTCAGACGGAGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 40068
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || |||||||| | | |||||| || |
Sbjct 40067 GGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGG 40008
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | ||||| || ||| ||||| ||||| |||| | ||||| ||| || |
Sbjct 40007 AGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTATCGCTGGGCT 39949
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || |||||||||||||||||||| |||||
Sbjct 39948 CCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 39897
Score = 145 bits (160), Expect = 5e-30
Identities = 173/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || ||||| | | ||| ||||| || || ||| || ||||||||||||||
Sbjct 40355 CATACCACCCCTCAGACGGAGCACGAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATC 40296
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| ||| ||| | || ||||||||||| || |||||||| | | |||||| || |
Sbjct 40295 GGAGAGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCAAAGATGAGCCTCTGCTGGTCGGG 40236
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
||| | ||||| || ||| ||||| ||||| |||| | ||||| ||| || |
Sbjct 40235 AGGGATGCCTTCTTTATCCTGGATCTTGGCCTTCAC-GTTCTCGATGGTATCGCTGGGCT 40177
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || |||||||||||||||||||| |||||
Sbjct 40176 CCACCTCCAGGGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 40125
>seq7134
Length=91468
Score = 149 bits (164), Expect = 5e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 86761 CATGCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 86702
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| |||||||||||||||||||||||||| | |||||| ||||
Sbjct 86701 AGACAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 86642
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| || ||||| ||| | | | |||||||| || ||
Sbjct 86641 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTC 86582
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||| || || ||||| || || | ||||||||||||||| ||||||
Sbjct 86581 CACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 86530
Score = 149 bits (164), Expect = 5e-31
Identities = 172/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | || |||||||| || ||| |||||| ||||||||||| ||
Sbjct 86989 CATGCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 86930
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| |||||||||||||||||||||||||| | |||||| ||||
Sbjct 86929 AGACAGAGTGCGGCCGTCTTCCAGCTGCTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 86870
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| || ||||| ||| | | | |||||||| || ||
Sbjct 86869 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTC 86810
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||| || || ||||| || || | ||||||||||||||| ||||||
Sbjct 86809 CACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 86758
Score = 140 bits (154), Expect = 2e-28
Identities = 170/232 (73%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | || |||||||| || ||| ||| || ||||||||||| ||
Sbjct 87217 CATGCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 87158
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 87157 AGACAGAGTGCGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 87098
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
|| | || ||||| || ||||| ||| | | | |||||||| || ||
Sbjct 87097 GGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTC 87038
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|||||||| || || ||||| || || | ||||||||||||||| ||||||
Sbjct 87037 CACCTCCAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATG 86986
Score = 132 bits (146), Expect = 3e-26
Identities = 170/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || ||||| || | || |||||||| || ||| ||| || ||||||||||| ||
Sbjct 86533 CATGCCGCCTCTGAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTC 86474
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
| || ||| |||| |||||||| ||||||||||||||||| | |||||| ||||
Sbjct 86473 AGACAGAGTGCGGCCGTCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCTGG 86414
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATT 44285
|| | || || ||||| |||||| ||| | |||| | |||||||| || |
Sbjct 86413 GGGGATGCCCTCTTTTTCTTGGATCTTCCCCTT-GACGTTCTCGATGGTGTCACTGGGCT 86355
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||||| || || ||||| || || | || || |||||||| |||||
Sbjct 86354 CCACCTCCAGGGTGATGGTCTTACCGGTCAACGTTTTTACGAAGATCTGCAT 86303
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| | ||| ||| || ||||||||||| || | || ||| | || |||
Sbjct 87423 ACCAAGTGCAAGGTGGACTCTTTCTGGATGTTGTAGTCAGACAGAGTGCGTCCATCTTCC 87364
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||||||||||||||||| | |||||| |||| || | || ||||| ||
Sbjct 87363 AGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCATGG 87304
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | |||||||| || |||||||||| || || |||||
Sbjct 87303 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTA 87244
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
|| || | ||||||||||||||| ||||||
Sbjct 87243 CCGGTCAAGGTCTTCACGAAGATCTGCATG 87214
>seq66
Length=542294
Score = 102 bits (112), Expect = 6e-17
Identities = 151/212 (71%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||||| ||| || | ||||||||||| || || | | | || |||
Sbjct 261613 ACCAAGTGAAAGGTGGACTTTTCCTGGATGTTGTAGTCAAACAGAGTGTGTCCATCTTCC 261672
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
| ||||||||| ||||||||||| | |||||| |||| || | || ||||| ||
Sbjct 261673 AACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCTTGG 261732
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | |||||||| || |||||||||| || || ||||
Sbjct 261733 ATCTTGGCCTTGACATTGT--CGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCT 261790
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| || || ||||||||||| ||||| ||||||
Sbjct 261791 TACCGGTCAGGGTCTTCACAAAGATCTGCATG 261822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359583373704324
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