Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Manis_20pentadactyla_20[genbank_20GCA_5F000738955.1_202014-08-11] 92,772 sequences; 2,204,732,179 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq1509 161 1e-34 seq7786 129 8e-25 >seq1509 Length=219255 Score = 161 bits (178), Expect = 1e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||| | ||||| || |||||||||||| |||||||| || ||||| || || Sbjct 162864 GTCTGGAATAACTGCTCATCGTCCCATTCTGGATGCTCTTGTTTAAGTACATCACATACT 162805 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||| ||||||| ||||| || ||||| |||||||| || ||||| ||||||||||| Sbjct 162804 CTGTTATGTTCCCGAAGCCAAATTGTGGCATACATCATCAGACCAGGCACCAGGCCAAAG 162745 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 |||| || || ||||| | ||| | ||| || || | || || |||||||| | Sbjct 162744 ACCTCCTGGCCCACAGCAAACTGCAGATGTTCAGGGACGTGAGGCGGGTAGATCATCTTG 162685 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484 ||||| |||||||| | ||| |||||||| || || |||| |||| Sbjct 162684 ACCTGAGTATCTTTGACTGTGGGAGGATACATCTCTCCATCAACTATCT 162636 Score = 141 bits (156), Expect = 1e-28 Identities = 225/323 (70%), Gaps = 0/323 (0%) Strand=Plus/Minus Query 8263 CTTGAGGAGCTCCTCATCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCT 8322 |||| ||||| || ||| |||| | ||| | | || ||||| ||||| || || | Sbjct 164475 CTTGGTGAGCTGCTGATCTTGAACACTGAATGAAGTAAAAGGACAGCCCTTCACATTCTT 164416 Query 8323 ACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAA 8382 |||| ||||||||||| | || |||| ||| || || || ||||| || || Sbjct 164415 GCAGATAAGAGACTGAATTGAGGCAGCGTTGATGATTTTAAAACCTACTTCTCCACCAAA 164356 Query 8383 GGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGA 8442 ||||| |||||||||||| | || || || ||| || |||| || ||||| ||||| Sbjct 164355 AGTGCTAGGCTTCCAGTACTCAGGAGAACATATGGGATTACCCATAAGTCCTTTCAGGGA 164296 Query 8443 GAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTC 8502 ||| || || || | || | ||| ||||||| || ||||| | || || |||||||| Sbjct 164295 GAATGGTGCTCCAAGTTCTACCATGGTCTCACCAAAAATGGCATCTGGGCGAGGCTTTTC 164236 Query 8503 CACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTC 8562 ||||| | | | |||||||||| || || | ||| || || || || | || Sbjct 164235 TACCAAAAGGGCAGGATACAGCTCCATGGCATCAATGTCACCATAGAGAGCTTCTAACTC 164176 Query 8563 GGCAGCGATCTCCTTTTCTCCTG 8585 ||||| || ||||| ||||||| Sbjct 164175 CGCAGCCATTTCCTTCTCTCCTG 164153 Score = 123 bits (136), Expect = 4e-23 Identities = 121/156 (78%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||||| ||||| || || |||||| ||| ||| | || Sbjct 161698 TCTTACCCCATGGCCCAGTCCTTTGGTGAAAGCTGGTCCTCGCCTATGATCTGTCTTGAA 161639 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||| || || ||||| || ||| |||| || |||||||| | || |||||||||||||| Sbjct 161638 AAATTGATGTGTGAAGTGCTGGGCAAAGAATGCAAACATCATATTTGTGCCCTGGGGATC 161579 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCAC 9804 || |||| | |||| |||||| ||||||||| Sbjct 161578 AGGGATGAACTTTCTCCTTAGAAGAAATTTTTCCAC 161543 Score = 87.8 bits (96), Expect = 3e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| || || | || ||||| || | || || || ||||| ||| || | Sbjct 161093 TCACCTTTCACACCCATGGGTGTTGGGCAGTTGTCAGCCACAGGAGGAAGAGCTCTGGTA 161034 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||| ||||| || || |||||||||||| ||| | |||| || ||||| | Sbjct 161033 TAATAGGAAAGATTAGAAAAGGCTTCCCAGCTTTTGTAGCCATAGTGTGCATTGTAAGTT 160974 Query 10028 GGAGGGCTGTCAATCAAATCGGATCT 10053 || |||||| ||||||||| ||||| Sbjct 160973 GGTGGGCTGGCAATCAAATGTGATCT 160948 >seq7786 Length=85644 Score = 129 bits (142), Expect = 8e-25 Identities = 212/306 (69%), Gaps = 0/306 (0%) Strand=Plus/Minus Query 8279 TCGGGAACTCGGAACGCGGCCAACGGACACCCCTTGACGTTGCTACAGACTAGAGACTGA 8338 ||||| || ||||| | | | ||||| |||| |||| ||||| || || Sbjct 27161 TCGGGCACGCGGAAGGAAACGTAGGGACAGGTCTTGGTGTTGAGGCAGACCAGTTTCTTC 27102 Query 8339 ATAGTTGCGCTCTTGACGATCCCGAACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAG 8398 | || ||| ||||||| || ||| |||| || || || || ||||| ||||||||| Sbjct 27101 AGCGTGGCGGTCTTGACAATGTTGAAGCCCATCTCGCCCCCAAATGTGCTCGGCTTCCAG 27042 Query 8399 TACCCCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAAC 8458 ||| | || || |||||| |||| ||| |||||| |||||||| || || ||||| | Sbjct 27041 TACTCTGGAGAACAGATGGGGTTCCCCAGGAGGCCCTTGAGGGAAAAGGGGGCCCCGATT 26982 Query 8459 TCGAGAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTG 8518 || | || ||||| || ||||||| ||| ||| || || || | | | || | | Sbjct 26981 TCTATCATACTCTCCCCAAAGATGGAGTTCGGATGGCATTTCTCGAGAAGCAGCCCCGGG 26922 Query 8519 TACAGCTCCACAGCCTCGACGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTT 8578 || | ||||| ||| || | |||||| || || || ||||| | || |||||||| Sbjct 26921 TAGAACTCCAAAGCATCAATGTCTCCATATAGATCCTCCAGTTCAGTTGCCATCTCCTTC 26862 Query 8579 TCTCCT 8584 |||||| Sbjct 26861 TCTCCT 26856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716045473818880