Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq36395 102 8e-17 seq32041 98.7 1e-15 >seq36395 Length=32485 Score = 102 bits (112), Expect = 8e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| |||||||| || ||||| |||||||| || | || ||||| |||| ||||| Sbjct 15295 CTTCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 15354 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||||||||||||| |||||||| || || || ||||| || || || |||| ||||| | Sbjct 15355 TTAACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 15414 Query 16344 C 16344 | Sbjct 15415 C 15415 Score = 84.2 bits (92), Expect = 2e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 15925 AACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTTCCATAAAATCAAA 15984 ||| ||||| || ||||| || |||||||| |||||||| || ||||||||||||||||| Sbjct 6936 AACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCCATAAAATCAAA 6995 Query 15985 GGGATT 15990 |||||| Sbjct 6996 GGGATT 7001 >seq32041 Length=12153 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || |||||||| |||||||| |||||||| || | || ||||| |||||||||||| Sbjct 9135 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9194 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | ||||||||| | ||||| || || |||||||| || || || || | |||||||| Sbjct 9195 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGC 9253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510181431023040