Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq166506 455 2e-123 seq163223 320 1e-82 seq1424 248 6e-61 seq149460 132 3e-26 seq76481 111 1e-19 >seq166506 Length=3163 Score = 455 bits (504), Expect = 2e-123 Identities = 435/557 (78%), Gaps = 16/557 (3%) Strand=Plus/Plus Query 3976 TTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACATTAGAAAGA 4035 ||||| |||||||||||||||||||||||||| |||||| ||||| || | ||||||| Sbjct 797 TTCTT-TCATATACTTCAAATTTGTACTTAATGTCTTTCTCCTCTTGGACGTCAGAAAGA 855 Query 4036 ACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTG 4095 |||| ||| || | | | |||||||||| |||| | ||||| |||||||||||| ||| Sbjct 856 ACACCTGGGTAGTTTGGGAGAAGTTTGTATCTCTCCAAATCAATTTCTGGAAAAAATGTG 915 Query 4096 TCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTC 4155 |||| |||||| || ||||||||||| | |||| | ||| |||||| || ||| | || Sbjct 916 TCACTTTCAAATTCCTGCATGATCCTTGGCACAGATAGTCTAAGATGGCCTGGTTTGTTC 975 Query 4156 ATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCT 4215 || ||||| || || |||||||| | ||| | |||||| |||||||| |||||||||| | Sbjct 976 ATGGCTTCCTTGTATACAGAACTGCTTCCCACTATCCAAACCATGTCCACTTTATTTGTT 1035 Query 4216 AATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCT 4275 |||||||| | || |||||||||| |||||||| | |||||| || | |||||||||| Sbjct 1036 AATTCTGGTTCCTCAATAAGTTTTAAGGCATCATCCAGACTCTTGGCAAGAAAATGAGCT 1095 Query 4276 CTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGC 4335 | |||||| | ||||| ||||| | |||||||| | |||||| ||| | ||| |||| Sbjct 1096 CCTTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTCAAGGT 1155 Query 4336 CGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTA 4395 || |||||||| ||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct 1156 CGATTCTTCTCGGGAATGGAGAACCAGGTCTTTCTACCCATAATCACCAAATTCTGTTTA 1215 Query 4396 TCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCATAAGTCTT 4455 | | | ||||| || |||||||||||||||||| || || |||||| | || Sbjct 1216 CC---TTCTGAAGAGGTTGTAGTCATTCTTTGGAAACACTTGAATTCATTCCTGAGCAGG 1272 Query 4456 GGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAACAATGCAG 4515 || | |||| || ||||||||||||| | | ||||| | |||||| Sbjct 1273 GGTGAGGGCAGGT------------CAATGCCCATGTTCGGGGACACAGCGAGGATGCAG 1320 Query 4516 TTTAGTGCTTGAACCAT 4532 ||||||| ||||||||| Sbjct 1321 TTTAGTGTTTGAACCAT 1337 >seq163223 Length=4206 Score = 320 bits (354), Expect = 1e-82 Identities = 404/551 (73%), Gaps = 3/551 (1%) Strand=Plus/Plus Query 3969 TTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACATT 4028 ||||| |||||| ||||| ||||| ||||||| |||| |||||| | ||| | | Sbjct 1706 TTAATCATTCTTTTCATAGACTTCCTATTTGTATGTAATGTCTTTCTCCTGTTGGATAGC 1765 Query 4029 AGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA- 4087 |||||||| || | ||| | | || ||| |||||||| | ||||| |||| ||| Sbjct 1766 AGAAAGAAAACCTAAGTATCTTGGGAGAATTTTATATTTCTCCAAATCAATTTCTAGAAG 1825 Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAGATCGCATG 4147 ||||| | |||| |||| | || ||||||||| | |||||||| | |||||| || || Sbjct 1826 AAAAGATATCACTTTCAGATTCCTGCATGATCTTTGTCACAAATCATGTAAGATGGCCTG 1885 Query 4148 GATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTT 4207 | | | | ||| ||||| |||||||| ||||| | |||||| |||||||| |||| Sbjct 1886 GCTTCTTTGTGCTTTCCTTATAAACAGAACTGCCTCCCACTATCCAAACCATGTCCACTT 1945 Query 4208 TATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAA 4267 ||| || ||||| ||| || | ||||||||||| | | || | || || || | || Sbjct 1946 TATGTGTTAATTTTGGTTGCTTAGTAAGTTTTAAGGTGTTGTCCAGTCTTTTGGCCAGAA 2005 Query 4268 AATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTT 4327 ||||||||| ||| || | ||||| ||||| | |||||||| | | |||| ||| | | Sbjct 2006 AATGAGCTCCCTGTAGAGGTTCCTTGAGTTCTCTACTGAGAACTAAAGTAATCCTGTCCT 2065 Query 4328 TTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACTAAAT 4387 ||||| | | ||||||||||| || |||||||| |||||| ||| ||||||| | ||| Sbjct 2066 TTAAAAGTTGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACTCATAATCGCCCAAT 2125 Query 4388 TCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGTTTAAAATCATTCA 4447 |||||||| || | | ||||| || || | || ||||||||||| || || |||||| Sbjct 2126 TCTGTTTACCTTCT-CTGAAGAGGTTGT-GACACTCTTTGGAAATACTTGAACTCATTCC 2183 Query 4448 TAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTACAGCAA 4507 | || | ||| ||||||| || | |||| ||||||||||| || | ||||| | Sbjct 2184 TGAGCAGGGACCAGGGCAAGTCTCCCTTCTTGCTGATGCCCATGTTCTGGGACACAGCGA 2243 Query 4508 CAATGCAGTTT 4518 ||| ||| || Sbjct 2244 CAAGCCAGCTT 2254 >seq1424 Length=6354 Score = 248 bits (274), Expect = 6e-61 Identities = 403/574 (70%), Gaps = 16/574 (3%) Strand=Plus/Minus Query 3968 ATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTCTCTTCTTGCACAT 4027 |||||| |||||| || |||||||||| ||| |||| ||| | | ||| || | | || Sbjct 6253 ATTAATCATTCTTTTCTTATACTTCAATTTT-TACTGAATGCAATCCTCCTCCTAGAAAT 6195 Query 4028 TAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAA 4087 || |||||||| ||| | |||| | |||| | ||||||| | ||||| |||||||| Sbjct 6194 AAGGAAGAACACCTGGGTGTTCTGGGAGAAGTCTTCATTTCTCCAAATCAATTTCTGGAA 6135 Query 4088 AAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGTTTAAG----ATCG 4143 || | ||||| | |||||| || ||||||||||| |||||||| || |||| || | Sbjct 6134 AACATGTGTCCCTTTCAAATTCCTGCATGATCCT-GTCACAAATGGTCTAAGTAAGATGG 6076 Query 4144 CATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAGACCATGTCT 4203 | | | | |||| |||| | ||| |||||| | | || | | | ||||| ||| Sbjct 6075 CCTAGCTTGTTCATCACTTCCTAATAAACAGAATTGCTTCTCACTGTGTGAACCATATCT 6016 Query 4204 ACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCT 4263 ||||| || |||||||| | || ||| |||||| ||||||| | ||| | | | Sbjct 6015 ACTTTGTT----AATTCTGGTCGCTCAATAAATTTTAAGGCATCATTCAGACTTTCGGTT 5960 Query 4264 AAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACATTAATTCTG 4323 | ||||||| ||||||| ||||| ||||| | ||| | | | | |||| ||| Sbjct 5959 GA----TGAGCTCCTGGTGGAAGTTCCTTGAGTTCTCTCCTGGGTAATAAAATAATCCTG 5904 Query 4324 CCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCCATAATCACT 4383 |||||||| | ||||| | ||| | |||||||| ||||| ||||| ||||||| Sbjct 5903 TTCTTTAAAGGTCAATTCTTTTGGGGATTGGAGAACCAGGTCTTCCTACCCTTAATCACC 5844 Query 4384 AAATTCTGTTTATCTGGTACAGAAGATG-TAGTAGTCATTCTTTGGAAAT-GTTTAAAAT 4441 |||||||||||| || || ||| | | | | ||||||||| ||||||| || || | Sbjct 5843 AAATTCTGTTTACCTTGTGTTGAAAAGGTTGGGAGTCATTCTCTGGAAATAACTTGAATT 5784 Query 4442 CATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTTTGAGCTA 4501 || || | | | | ||| ||| || || | || | |||||| |||| | | | Sbjct 5783 CACTCCTGAATGGGGACCAGGGCTGGTCTCCATTCTTTCTGATGCCCGTGTTCTCGGGCA 5724 Query 4502 CAGCAACAATGCAGTTTAGTGCTTGAACCATAAT 4535 ||| | |||||||||||| | |||||||||| Sbjct 5723 CAGTGATGGTGCAGTTTAGTGATGGAACCATAAT 5690 >seq149460 Length=16601 Score = 132 bits (146), Expect = 3e-26 Identities = 105/126 (83%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| ||||| | |||||| |||||||| |||||||||| ||||||||| Sbjct 11956 TTATATACAGAACTGCCTCCCACTATCCAAACCATGTCCACTTTATTTGTTAATTCTGGT 12015 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 | || |||||||||| |||||||||| |||||| || | ||||||||||| |||||| Sbjct 12016 TCCTCAATAAGTTTTAAGGCATCATCTAGACTCTTGGCAAGAAAATGAGCTCCTTGTGGA 12075 Query 4285 AGCTCC 4290 | ||| Sbjct 12076 GGTTCC 12081 Score = 120 bits (132), Expect = 2e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 |||||||||| |||||| ||||| |||||||||||| ||||||| |||||| || ||||| Sbjct 9543 AAGTTTGTATCTCTCTAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCAT 9602 Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166 |||||| |||||||| ||| |||||| || ||| | |||| ||||| || Sbjct 9603 GATCCTTGTCACAAATAGTCTAAGATGGCCTGGTTTGTTCATGGCTTCCTT 9653 >seq76481 Length=4075 Score = 111 bits (122), Expect = 1e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| |||||||| | |||||| ||| | |||||||| || ||||||||||| Sbjct 2384 CTTGAGTTCTCGACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGG 2325 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| |||||||||| || |||||||||||| || Sbjct 2324 AATGGAGAACCACGTCTTCCTACCCATAATAACCAAATTCTGTTTACCT 2276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360402032994872