Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq166013 152 6e-32 seq32041 114 2e-20 seq36395 111 2e-19 seq60851 104 3e-17 seq63341 102 1e-16 seq88670 91.5 2e-13 >seq166013 Length=23081 Score = 152 bits (168), Expect = 6e-32 Identities = 116/137 (85%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| | | Sbjct 8786 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATA 8727 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 || ||||||||||||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 8726 GATTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 8667 Query 53270 CTATTTCTAAGACCGTA 53286 |||||||| | ||| || Sbjct 8666 CTATTTCTTATACCATA 8650 >seq32041 Length=12153 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 24157 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 24216 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 9133 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9192 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct 9193 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 9252 Query 24277 C 24277 | Sbjct 9253 C 9253 Score = 104 bits (114), Expect = 3e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||||| || || ||||| | ||||| |||||||| ||||| |||||||| ||||| Sbjct 11153 ATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 11212 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 24499 ||||| || |||||||| || | ||| ||||||||||| ||||| Sbjct 11213 AATTTGGAAGCCGTAGAAGCAGCGAGCTTCGGTAATCTGAACTTC 11257 >seq36395 Length=32485 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 24159 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 24218 || ||||| ||||| | ||| |||||||| |||||||| ||||| || || | || || Sbjct 15297 TCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 15356 Query 24219 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 24277 | ||| ||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct 15357 AACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 15415 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 24519 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 24578 |||||||||||||| ||||| |||||||| |||||||| || || | || |||||| Sbjct 21442 AAATTTTCATTCACAATTCCATCACTGGCAGCAAAAAAGGCTAAGATGTGAGAGATAAAA 21501 Query 24579 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 24627 ||||| || |||||| | ||| | ||||| | | || ||| || |||| Sbjct 21502 TATTTCTCATCTGGTTTAAGTCTGTTCCAGTGAGGGAGATCCTTTGATA 21550 >seq60851 Length=21511 Score = 104 bits (114), Expect = 3e-17 Identities = 102/132 (77%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 54028 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 54087 |||||||||||| |||||||| |||||||||||||| | || ||||| |||| | || Sbjct 2454 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTG 2513 Query 54088 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 54147 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 2514 CTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGG 2573 Query 54148 TTCCAAGTATAT 54159 |||||||| || Sbjct 2574 CTCCAAGTAAAT 2585 Score = 96.9 bits (106), Expect = 4e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 ||||||| | ||| ||||||||||| || | || || || || || || || || |||| Sbjct 14103 CACTAAACACTTTCTTTGTTTCTTTATGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 14162 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 ||||||| || || || | ||||| | || || ||| |||| || | || ||| || | Sbjct 14163 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 14222 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 14223 GTTCCACGGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 14268 >seq63341 Length=12409 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 53417 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 53476 || || ||||| || || || || || ||||||||||||||||| ||||||| |||||| Sbjct 8783 GCCAGATCACAGCTGGCTTCCAAGGCTCCGTAATAAATGGTTTCAAAGATCTGCTTATTC 8724 Query 53477 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 53536 | || || || | || ||||| ||||| | | |||||||| || |||||||| Sbjct 8723 AATAACTGAGCCTCTGGACTCTCAAAAGGATATCTCATCAGAATAAAAGCATCTGCTAAA 8664 Query 53537 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 53577 ||||| || ||||| || || || | ||| | ||||| || Sbjct 8663 CCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 8623 >seq88670 Length=2616 Score = 91.5 bits (100), Expect = 2e-13 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 21883 TCCGGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 21940 |||||| || ||||| ||| ||| | ||| | ||| ||||| | ||| |||||| Sbjct 2336 TCCGGTGGAACCAAAACCTCCTGAACCCCTTTCCGTGTC--ATCTAAAACTTGAACTTCT 2393 Query 21941 TTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCCGTATTT 22000 | | ||||||| | | | | || | | || ||||| || |||| || ||| | || Sbjct 2394 TCTATTTCTGGACTAAAAACCCTTTCACAAATGAGCTGGGCAATTCGGTCACCCTTTTTG 2453 Query 22001 ACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTATAATCT 22060 || | ||| | | ||| ||| ||||| || | || || |||||||| ||||||||| Sbjct 2454 ACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACGCCAATATTTCCTCTATAATCT 2513 Query 22061 TCGTCTATTACACCGCCTCCTATATC 22086 || ||||| ||||| |||||||||| Sbjct 2514 TCATCTATGACACCAGCTCCTATATC 2539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592290196594560