Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq31744 289 3e-73 seq4237 87.8 2e-12 >seq31744 Length=26916 Score = 289 bits (320), Expect = 3e-73 Identities = 267/338 (79%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| || ||||||||||| | | | | |||||| ||||| |||||||||||||| Sbjct 18637 AGCAGGGCTTCAATGTCGGGCTCAATGTCGATGGTCTGAAAGCGGCGGCTGTACCTGCGC 18578 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| |||||| ||||||| |||||||||||||||||| || |||||||||||| Sbjct 18577 ACAGGCACGCCGTCCCGGCCCACCAGGAACTTCTCGAAGTTCCACGCAACGTCGTTGCGG 18518 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 || || ||||||||| || | || ||||||| ||| ||||| | |||| || || Sbjct 18517 CATACCGGAGACCAGATGATAAACTTGGGGTCGGTCATGAGCGCAGTGGTGTCATCACTG 18458 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||| ||||| ||||| || | ||| ||||||||||| || ||| | || || || ||| Sbjct 18457 GGCATGGGCAGAGCCTCCCGCAAGAAAGCGAAGAGCGGGTGCGCCTTCGCGCCATTCACC 18398 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 ||||||||||||||||| | ||||| |||||||| ||| |||||| ||||||| ||| Sbjct 18397 TCGCACTTCTCGAAGAGTGTGAAGTTGGGCTCGAACCCGCCCCCAGGGCGGACGTACTTG 18338 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 |||||| || |||||| | |||| |||||| ||||| Sbjct 18337 AGGGAATTCAGGATCTCTTCGTTCTTGGCGTTCTCCTG 18300 Score = 154 bits (170), Expect = 2e-32 Identities = 123/148 (83%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || ||||||||||| |||||||| |||||||| ||||| ||||| | || |||| Sbjct 18074 CCTGATGCCCGAACTGGTTGCACGGGAAGCCAAGCACAACCAGGCCCCGGGGCCCGAGGC 18015 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 |||||||||||||||||||||| ||||| ||||||||||| | |||||||| || || | Sbjct 18014 GCCGCTGCAGCTCGTTCATCTGGGTGTAGTCCCGGACCGTTGTGCCTCAGAGCGATGCGA 17955 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCG 83538 | ||||| ||||| | ||| |||||| Sbjct 17954 CATTCTCTATGAGTAGCACCTTGCCCCG 17927 >seq4237 Length=45918 Score = 87.8 bits (96), Expect = 2e-12 Identities = 229/343 (67%), Gaps = 6/343 (2%) Strand=Plus/Plus Query 83056 GAGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCG 83115 ||| ||| || |||||||||||| | | || || || | ||||||| | || Sbjct 17716 GAGGAGGCGCTTGATGTCGGGCTCAATGTTGGCTGTAGGGAAGGTGCGGCTGTAGCGTCG 17775 Query 83116 CACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCG 83175 | |||| || || | || | | ||||||||| |||||||||||||| ||| ||| Sbjct 17776 GAAGGGCTCTCCCTCCGGCCCAATGAGGAACTTCTCAAAGTTCCAGGCCACATCGGAGCG 17835 Query 83176 GCACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCT 83235 || ||| || ||| |||| || ||| ||| ||| ||| | | | ||| ||| | Sbjct 17836 GCGCACCGGGCTCCAAATGATGAACTTGGGATCGGTCATGAGAGAGAACGGGTCATCG-T 17894 Query 83236 AGGCGCCGGCAGGGCCTCTCGT--AGGAAGGCGAAGAGCGGATGTGCCCT-TGCACCGTT 83292 | | | || | || | || | ||| ||||||||| || || | | ||| || || Sbjct 17895 AAGGGTAGG-GGAGCTTGTCCTTCAGGTAGGCGAAGACAGGGTGCTCGTTCTGC-CCATT 17952 Query 83293 GACCTCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTG 83352 ||||| ||||||| || || ||||| | |||| ||| || |||||| ||||||| Sbjct 17953 CACCTCACACTTCTGGACAAGGGTAAAGGTGGGCTGGAATCCACCCCCAGGGCGGACGTA 18012 Query 83353 CTTCAGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTGG 83395 ||| || || |||||| ||||||| || |||||| Sbjct 18013 CTTGAGACTGTTCAGGATCTCCTCATTCTGACAATTCTCCTGG 18055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 607329051794880