Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq55711 111 1e-19 seq22649 98.7 8e-16 seq98110 93.3 4e-14 seq178408 91.5 1e-13 seq102106 91.5 1e-13 >seq55711 Length=2414 Score = 111 bits (122), Expect = 1e-19 Identities = 153/213 (72%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| ||||| |||||||| || || |||||||| || | || || ||| | ||| Sbjct 2081 AGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCC 2140 Query 21024 TCCAGCTGTTTGCCCGC-ATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTC 21082 ||||||||||||||||| | |||| || | ||||||||| || | ||| |||||||| Sbjct 2141 TCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 2200 Query 21083 GGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGT 21142 ||| || ||| || | | | ||| |||| |||||| || | || || || Sbjct 2201 TTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGT 2260 Query 21143 CTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||||| || | || || ||||| || ||||| Sbjct 2261 CTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq22649 Length=5672 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 20967 ACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCC 21026 |||| |||| ||| |||| || || ||||||||||| | || || || | |||||| Sbjct 768 ACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTCC 709 Query 21027 AGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCG 21086 |||||||||||| || |||| || ||||||||| || | ||| |||||| | | Sbjct 708 AGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGGAGGCCCTCCTTGGCTTGG 649 Query 21087 ATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTG 21146 || || ||| || | | | ||| |||| |||||| || | || ||||||||| Sbjct 648 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTCTTG 589 Query 21147 CCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || | || || ||||| || ||||| Sbjct 588 CCCGTCAGGGTCTTCACAAAGATCTGCAT 560 >seq98110 Length=40326 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | || |||| |||| |||||||| || || |||||||| || | Sbjct 16451 CCACCCCGCAGACGAAGTACCAAGTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 16510 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||||||||||||| |||| || | ||||||||| || Sbjct 16511 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGA 16570 Query 21069 ACGCCTTCCTTGTC 21082 | ||| |||||||| Sbjct 16571 ATGCCCTCCTTGTC 16584 >seq178408 Length=1377 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/132 (76%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 20951 CCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAG 21010 |||| |||| | | ||||| |||| |||||| | || || |||||| |||||| || Sbjct 1159 CCCT-GCAGACAAAACACCAAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAG 1101 Query 21011 GGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCAC 21070 || || | |||||||||||||||||||| |||| || | ||||||||| || || Sbjct 1100 AGTGCGGCCATCCTCCAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGAC 1041 Query 21071 GCCTTCCTTGTC 21082 ||| |||||||| Sbjct 1040 GCCCTCCTTGTC 1029 >seq102106 Length=31366 Score = 91.5 bits (100), Expect = 1e-13 Identities = 100/132 (76%), Gaps = 1/132 (1%) Strand=Plus/Plus Query 20951 CCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAG 21010 |||| |||| | ||||||| |||| |||||||| || || || ||| |||| | || Sbjct 14534 CCCT-GCAGACGAAGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTAGAGTCTGAGAG 14592 Query 21011 GGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCAC 21070 || ||| | ||||||||||||||||| || |||| || ||||||||||| || | Sbjct 14593 AGTGTGGTCACCCTCCAGCTGTTTGCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGAT 14652 Query 21071 GCCTTCCTTGTC 21082 ||| |||||||| Sbjct 14653 GCCCTCCTTGTC 14664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421266625912352