Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq52001 107 2e-18 seq89478 105 7e-18 seq66368 105 7e-18 seq178408 98.7 1e-15 seq55711 96.9 4e-15 seq98110 93.3 4e-14 seq22649 91.5 2e-13 seq12885 87.8 2e-12 >seq52001 Length=6774 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 |||||||| | | |||| ||| ||||| |||||||| |||| |||||||| |||| Sbjct 6770 GACCAGCAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGCACCCTGTCCGAC 6711 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGCTT 40922 |||||||||||||||||| |||| ||||| || || |||||||||| || || | ||| Sbjct 6710 TACAACATCCAGAAGGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGAGGAGGTGTCTT 6652 >seq89478 Length=33119 Score = 105 bits (116), Expect = 7e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC-CACCGACAGCGTGCA 40760 || || || || | |||||| |||||||| |||| | | |||| || ||||| | | Sbjct 14373 GTGAAGACCCTGATGGGCAAGACCATCACACTCGAGGCC-AAGCTCAGTGACAGTATTGA 14431 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | |||| | ||||| | ||||||||||||||| | |||||||| | || || Sbjct 14432 GAATGTCAAAGCTAAAATCCAAGACAAAGAGGGCATCTGACCTGACCAGCAGCATCTGAT 14491 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 | | ||||||||||||||| || | |||| ||| ||||| |||||||||||||| Sbjct 14492 TTTTGTGGGCAAACAGCTGGAGGATGGTTGCACTCTCTGAGACTATAACATCCAGAAGGA 14551 Query 40881 GGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 | |||| ||||| | ||| | | |||||||| || Sbjct 14552 GTCCACTCTGCACTTGGTGCTTCCTCTGAGGGGCAGC 14588 >seq66368 Length=2842 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||| | || || | | ||| || ||||| ||| | || || || ||| Sbjct 718 AATGCAGATCTTCATGAAGACCTTGAAGGGTAAGACCATAACCCTGGAGGTGGAGCCCAG 659 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| || || | |||||| |||||||||| | || || Sbjct 658 TGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAAAGGGCATCCCGCCTGATCA 599 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | | |||| | | |||| |||||||| ||| | | ||| ||||||||| Sbjct 598 GCAGAGGTTGATCTTCACCAGCAAGCAGCTGGAAGACAGAAGTATCCTTTCCGACTACAA 539 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| || || || |||||||||| || Sbjct 538 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGTGCTTGAGGGGAGG 491 >seq178408 Length=1377 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| | || ||||| || || | | || |||| ||| |||| ||||| ||| Sbjct 936 ATGCAGACCTTTGTAAAGACCCTGATAGAAAAGACCACCACACTCGAGGTCGAGCCCAGT 995 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || || | |||| | ||||| | ||||| |||||| |||| | ||||| Sbjct 996 GACACTACTGAGAATG-TCAAAGCTAAAATGCAAGACAAGGAGGGCGTCCCTCCTGACCA 1054 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || || | ||||||||||||||||| || | ||||| ||| |||| || Sbjct 1055 GCAGCGTCTGATTTTGGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCGGACTGTAA 1114 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTT 40901 ||||||||| | | |||| ||||| | ||||| Sbjct 1115 CATCCAGAAAGCGTCCACCCTGCACTTGGTGTT 1147 >seq55711 Length=2414 Score = 96.9 bits (106), Expect = 4e-15 Identities = 145/205 (71%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| || ||||| | || || || ||| Sbjct 2293 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATCACACTTGAGGTTGAGCCCAGT 2234 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | ||||| |||||||| || | |||||| Sbjct 2233 GACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACCAG 2174 Query 40810 CAACGACTCATCTAC-GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || || || | ||||||||||||||||| || | | || ||| || || || Sbjct 2173 CAGCGTCTGATTTTTTGCGGGCAAACAGCTGGAGGATGGCCATACTCTCTCAGATTATAA 2114 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||||||||| ||| |||| |||||| Sbjct 2113 CATCCAGAAAGAGTCCACCCTGCAT 2089 >seq98110 Length=40326 Score = 93.3 bits (102), Expect = 4e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 ||||| | ||||| |||||||| || | |||||||| || || || | ||||||||| Sbjct 16593 AAAATCCAAGACAAGGAGGGCATTCCACCTGACCAGCAGCGTCTGATTTCTGCGGGCAAA 16534 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| || | ||||| ||| || || ||||||||||| ||| |||| ||||| Sbjct 16533 CAGCTGGAGGATGGCCGCACTCTCTCAGATTATAACATCCAGAAAGAGTCCACCCTGCA 16475 >seq22649 Length=5672 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| |||||||| | || || || ||| Sbjct 560 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTTGAGCCCAGT 619 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||| | ||||| | | ||| |||||| |||| | |||||| Sbjct 620 GACACTATTGAGAATGTCAAAGCTAAAATCCAAGCCAAGGAGGGCCTCCCACCTGACCAG 679 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || | || || | | ||||||||||||||| || | || || ||| ||||| ||| Sbjct 680 CAGCATCTGATTTCTGTGGGCAAACAGCTGGAGGATGGCCGTACTCTCTCAGACTATAAC 739 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||| ||| ||| |||| Sbjct 740 ATCCAGAAAGAGTGCACCGTGCA 762 >seq12885 Length=29572 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||| ||||||||||||| | ||||||||| | || |||| || |||| |||| ||| Sbjct 23175 GACTAAGAGGGCATCCC--CCGACCAGCAAAGGCTGATCTTTGCTAGCAAGCAGCAGGAA 23118 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 || | |||||||| ||| | || ||| | ||| ||| |||| ||||| || || || Sbjct 23117 GATGGACGCACCCTGTCCGAATGCAGCATGCGGAAAGAGTCCACTCTGCACCTGGTCCTG 23058 Query 40903 CGCTTGAGGGGCGGCGGCTT 40922 | ||||||||| || | ||| Sbjct 23057 CACTTGAGGGGAGGAGTCTT 23038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513977058030720