Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq55711 105 6e-18 seq178408 104 2e-17 seq98110 95.1 1e-14 >seq55711 Length=2414 Score = 105 bits (116), Expect = 6e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || |||||||| || ||||| ||||| | ||| | |||||| Sbjct 2084 ACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCCTCC 2143 Query 118590 AGCTGTTTTCCAGCGTAGA-TGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || || | | | ||||||||||| || || || ||||||||||||||| Sbjct 2144 AGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 2203 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | || | ||||| || ||| ||||| | || | || || Sbjct 2204 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGTCTT 2263 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || ||||| |||||||| Sbjct 2264 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq178408 Length=1377 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 118527 AACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCC 118586 ||||||||||| | || ||| |||| || ||||| | || | |||||| |||| Sbjct 1147 AACACCAAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAGAGTGCGGCCATCC 1088 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || |||||||| || || | || ||||||||||| || ||||| | ||||||||||||| Sbjct 1087 TCCAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGACGCCCTCCTTGTCT 1028 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 ||||| ||| || | || ||||| || ||||||||||| || || Sbjct 1027 TGCATTTTAGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGGTGGTC 968 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | |||| || |||||||| ||||||| Sbjct 967 TTTTCTATCAGGGTCTTTACAAAGGTCTGCAT 936 >seq98110 Length=40326 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || |||||||| || ||||| ||||| | |||||| |||||| Sbjct 16469 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTGCGGCCATCCTCC 16528 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 |||||||| || || | || ||||||||||| || || || ||||||||||||||| Sbjct 16529 AGCTGTTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGG 16588 Query 118650 ATTTT 118654 ||||| Sbjct 16589 ATTTT 16593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432810626331424