Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq55711 102 9e-17 seq129265 98.7 1e-15 seq5094 98.7 1e-15 seq3712 98.7 1e-15 seq43270 91.5 2e-13 seq134456 89.7 6e-13 >seq55711 Length=2414 Score = 102 bits (112), Expect = 9e-17 Identities = 160/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | |||||||||| ||| ||| || || || || ||||| | Sbjct 2066 CCACCCCGTAGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 2125 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA-TGAGTCGCTGCTGGTCGGCCGG 43075 ||||| | | || || ||||| || || || || | | || ||||||||||| | || Sbjct 2126 AGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGG 2185 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || ||||||||| |||||| ||||| || | | ||||| || | || || Sbjct 2186 AATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAAC 2245 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| || |||||||| || ||||| |||||||| ||||| Sbjct 2246 CTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq129265 Length=9115 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 364 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 305 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 304 TACTAACGAGGA 293 >seq5094 Length=12911 Score = 98.7 bits (108), Expect = 1e-15 Identities = 66/74 (89%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| || | |||||| |||||| ||||||||||||||||||||| ||||||||||| Sbjct 4918 TTCTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCAC 4859 Query 60124 TATACTACCGAGGA 60137 ||||||| |||||| Sbjct 4858 TATACTAACGAGGA 4845 >seq3712 Length=4825 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1890 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1831 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1830 TACTAACGAGGA 1819 >seq43270 Length=7483 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| | ||||||||||| Sbjct 7107 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGA-ACTCACCACTA 7165 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 7166 TACTAACGAGGA 7177 >seq134456 Length=24149 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 10511 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 10570 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 10571 TACTAACGAGGA 10582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570439004948160