Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq22649 86.0 4e-12 seq55711 84.2 1e-11 seq112477 82.4 5e-11 >seq22649 Length=5672 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 34181 ACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCC 34240 |||| ||| | || | |||||||| ||||| ||||| || || |||| | || ||| Sbjct 768 ACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTCC 709 Query 34241 AACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCT 34300 | ||| ||||| | |||| || |||||||||| || | || ||||||| | Sbjct 708 AGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGGAGGCCCTCCTTGGCTTGG 649 Query 34301 ATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTT 34359 || ||| ||||| | || | || | || | | || || || | |||||||| || Sbjct 648 AT-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTCTT 590 Query 34360 GCCGGTGAGAGTTTTCACAAAGATCTGCATCGCT 34393 ||| || || || |||||||||||||||||| || Sbjct 589 GCCCGTCAGGGTCTTCACAAAGATCTGCATCTCT 556 >seq55711 Length=2414 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/197 (71%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 |||||||| ||||| || || || || | || | || |||| ||| ||||| || ||| Sbjct 2102 TCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAA 2161 Query 34259 A-TGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGAT 34316 | | || ||||||||||| || | || ||||||||| || ||| ||||| | || Sbjct 2162 AATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACAT 2220 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || | || | | || || || | ||||| || ||||| || || || |||| Sbjct 2221 TCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCA 2280 Query 34377 CAAAGATCTGCATCGCT 34393 |||||||||||||| || Sbjct 2281 CAAAGATCTGCATCTCT 2297 >seq112477 Length=10403 Score = 82.4 bits (90), Expect = 5e-11 Identities = 133/189 (70%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 34201 TTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAAT 34260 |||||| ||||| ||||| || || |||| | || |||| ||| ||| | || ||| | Sbjct 1552 TTTCTGGATGTTATAGTCTGAGAGAGCACGGCCATCCTCCAGCTGTTTGTCCGCAAAACT 1611 Query 34261 GAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGG 34319 | ||||||||||| |||| || | ||||||||| || ||| ||||| | || Sbjct 1612 CACACGCTGCTGGTCAGCGGGGACACCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCT 1670 Query 34320 CTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAA 34379 | || | || | | || || || | |||| ||| ||||| |||| || ||||||| Sbjct 1671 CAATAGTGTCACTGGGCTCAACCTCAAGTGTGACGGTCTTGCCCATGAGGGTCTTCACAA 1730 Query 34380 AGATCTGCA 34388 || |||||| Sbjct 1731 AGGTCTGCA 1739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322312578072320