Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq32041 123 2e-23 seq88670 86.0 6e-12 >seq32041 Length=12153 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| ||||||||||| || |||||||| | || ||||||| ||||||||| | Sbjct 9133 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9192 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| ||||||| || || || || |||||||| ||||| || ||||||||||| | Sbjct 9193 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 9252 Query 14346 CTATTAATCGTTCTCC 14361 | | | |||||||| Sbjct 9253 CCACGACACGTTCTCC 9268 Score = 93.3 bits (102), Expect = 4e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957 || || || |||||| | ||||| || | ||||| || ||||||||||||||||| || Sbjct 7743 GACATCACTCCCATTCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTTTTCCCC 7802 Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993 |||||||| ||||| ||||| || |||||||| ||| Sbjct 7803 TCCAGTGAAATATTCTCCATGAAGTCAAATGGGTTT 7838 >seq88670 Length=2616 Score = 86.0 bits (94), Expect = 6e-12 Identities = 119/167 (71%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 11641 CATCTAAACATTTAACTTCTTTAATTTTTGGATATTCTACTTTTTCAAAAATAATTTGCG 11700 |||||||| || |||||||| |||| |||| || ||||| |||| | || | Sbjct 2374 CATCTAAAACTTGAACTTCTTCTATTTCTGGACTAAAAACCCTTTCACAAATGAGCTGGG 2433 Query 11701 CCACTCGATCGCCTCTTTTAATATTAAATGTATTTTTACCATTATTAATAAATATAACTC 11760 | | ||| || || |||| | | ||| | | ||| ||| ||||| | || ||| | Sbjct 2434 CAATTCGGTCACCCTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACGC 2493 Query 11761 CAATGTTACCCCTATAATCTTCATCTATAACTCCTCCTCCTATATCT 11807 |||| || || ||||||||||||||||| || || ||||||||||| Sbjct 2494 CAATATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTATATCT 2540 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 481182712992960