Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq164519 82.4 6e-11 seq55711 82.4 6e-11 >seq164519 Length=6375 Score = 82.4 bits (90), Expect = 6e-11 Identities = 94/125 (75%), Gaps = 1/125 (1%) Strand=Plus/Plus Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167 ||||| | || | |||||| || || ||||||||||| |||||||| | || || | Sbjct 1273 AGTCTCAACACAAGGTGAAGGGTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGT 1332 Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227 | |||||| | ||| ||||| ||| |||| |||||||| |||| || | | | ||||| Sbjct 1333 CCATCTTCTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGAT-CAGGAGGAATTCTTCC 1391 Query 18228 TTATC 18232 ||||| Sbjct 1392 TTATC 1396 >seq55711 Length=2414 Score = 82.4 bits (90), Expect = 6e-11 Identities = 158/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||||||| | |||||||| || || || || ||||| || ||||| || || | Sbjct 2066 CCACCCCGTAGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 2125 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGC-ATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | | ||| |||| ||||||||||| | | || || | || || || || Sbjct 2126 AGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGG 2185 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||| ||||| || |||| | || ||||| | ||| |||||||| |||||| Sbjct 2186 AATGCCCTCCTTGTCTTGGATTT-TAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAA 2244 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||| | ||||| |||| || || ||||| || ||||| Sbjct 2245 CCTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378452303561640