Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq55711 109 5e-19 >seq55711 Length=2414 Score = 109 bits (120), Expect = 5e-19 Identities = 164/229 (72%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || ||||| | || ||||| || Sbjct 2293 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATCACACTTGAGGTTGAGCCCAGT 2234 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||||| | ||| |||||||| ||| | || || |||||| Sbjct 2233 GACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACCAG 2174 Query 31313 CAGCGTCT-AATATTCGCTGGCAAACAGTTGGAAGA-CTCTATGACTATGAGCGATTATA 31370 |||||||| | | || || ||||||||| |||| || | || ||| | ||||||| Sbjct 2173 CAGCGTCTGATTTTTTGCGGGCAAACAGCTGGAGGATGGCCAT-ACTCTCTCAGATTATA 2115 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 |||| || ||||| || || || ||| |||||||| | || |||| || Sbjct 2114 ACATCCAGAAAGAGTCCACCCTGCATTTGGTACTTCGTCTACGGGGTGG 2066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444691701786240