Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq32041 89.7 1e-12 seq36395 84.2 4e-11 >seq32041 Length=12153 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || ||||||||||| ||||||||||||||| |||| | || ||||| || |||||| Sbjct 9256 GTGGCTTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCAATATTCTGG 9197 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGA 102021 ||||||| | || | ||||||| ||||| | |||||||| Sbjct 9196 CTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGA 9153 >seq36395 Length=32485 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || ||||||||||| || |||||||| ||||| ||| | || || | || |||||| Sbjct 15418 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCTGGATCTTTTGCTGCTATATTCTGG 15359 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 | ||||| || ||| || ||||||| ||||||| |||||||| ||||| || || Sbjct 15358 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATTAGCAGAGAT 15299 Query 102038 GAAG 102041 |||| Sbjct 15298 GAAG 15295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987138567232760