Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq166013 143 3e-29 seq32041 111 2e-19 seq63341 105 8e-18 seq36395 102 1e-16 seq189111 100 4e-16 seq60851 100 4e-16 seq23463 98.7 1e-15 seq171033 87.8 2e-12 seq88670 82.4 1e-10 >seq166013 Length=23081 Score = 143 bits (158), Expect = 3e-29 Identities = 114/137 (83%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||||||||| |||||||||||||| | Sbjct 8786 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATA 8727 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 || ||||||||||||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 8726 GATTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 8667 Query 62508 CTATTTCTAAGACCGTA 62524 |||||||| | ||| || Sbjct 8666 CTATTTCTTATACCATA 8650 >seq32041 Length=12153 Score = 111 bits (122), Expect = 2e-19 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || | Sbjct 9133 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9192 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| ||||| || || || || || ||||||||||||||||| ||||||||||| | Sbjct 9193 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 9252 Query 33724 C 33724 | Sbjct 9253 C 9253 Score = 100 bits (110), Expect = 4e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||||| ||||| || || | ||||| |||||||| ||||| |||||||| ||||| Sbjct 11153 ATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 11212 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 33946 || || || |||||||| || | ||| ||||||||||| ||||| Sbjct 11213 AATTTGGAAGCCGTAGAAGCAGCGAGCTTCGGTAATCTGAACTTC 11257 >seq63341 Length=12409 Score = 105 bits (116), Expect = 8e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687 || || |||||||| || | | | || || | ||| || || || || || |||||| Sbjct 8810 TAGGTTTCATATGGGCCATGTTCTTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCGTAA 8751 Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747 ||||||||||||||||||| |||||| | || || || || || ||||| ||||| Sbjct 8750 TAAATGGTTTCAAAGATCTGCTTATTCAATAACTGAGCCTCTGGACTCTCAAAAGGATAT 8691 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 | | |||||||| || || ||||| ||||| || ||||| || || || | ||| | Sbjct 8690 CTCATCAGAATAAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 8631 Query 62808 TTATTAGA 62815 ||||| || Sbjct 8630 TTATTTGA 8623 >seq36395 Length=32485 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| ||||| | ||| || ||||| |||||||| ||||| || || | || || Sbjct 15297 TCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 15356 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 | ||| ||||| | ||| || ||||| || ||||| ||||||||||| ||||||||||| Sbjct 15357 AACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 15415 Score = 89.7 bits (98), Expect = 6e-13 Identities = 85/109 (78%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 33966 AAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 34025 |||||||||||||| |||||||||||||| |||||||| || || | || |||||| Sbjct 21442 AAATTTTCATTCACAATTCCATCACTGGCAGCAAAAAAGGCTAAGATGTGAGAGATAAAA 21501 Query 34026 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 34074 ||||| || |||||| | ||| | ||||| | | || ||| || |||| Sbjct 21502 TATTTCTCATCTGGTTTAAGTCTGTTCCAGTGAGGGAGATCCTTTGATA 21550 >seq189111 Length=3744 Score = 100 bits (110), Expect = 4e-16 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 |||||||||||||||||||||||||| |||| ||| || ||||| ||||||||||||||| Sbjct 134 TGCTCCTCCATCGAGGACGACTTCAATTATGGCAGTTCCGTGGCCTCTGCCAGCGTGCAC 75 Query 188232 ATACGAATGG 188241 || ||||||| Sbjct 74 ATCCGAATGG 65 >seq60851 Length=21511 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 63266 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATG 63325 |||||||||||| |||||||| |||||||||||||| | || ||||| || | | || Sbjct 2454 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTG 2513 Query 63326 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63385 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 2514 CTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGG 2573 Query 63386 TTCCAAGTATATGGC 63400 |||||||| || || Sbjct 2574 CTCCAAGTAAATAGC 2588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065 ||||||| | ||| |||||||| || || | || || | || || || || || |||| Sbjct 14103 CACTAAACACTTTCTTTGTTTCTTTATGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 14162 Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 14163 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 14222 Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171 ||| || || || || ||| | |||| ||||| || || ||||| Sbjct 14223 GTTCCACGGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 14268 >seq23463 Length=40887 Score = 98.7 bits (108), Expect = 1e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| ||| | | |||||||| | ||||||||| ||| ||| Sbjct 4312 GTTACTTTCTATGATGTATATATTATCCTGCAAGCTTTTGTACTGACTACTGGAGTATTT 4371 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | |||||| | |||||||||||| || ||||||||||| ||| ||| | |||| Sbjct 4372 CTTGGTTTGACTATGTATACTCTACAATCTAAAAGAGATTTCAGCAAATTTGGAGCAGG 4430 >seq171033 Length=4788 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 188241 GCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACA 188299 || |||||||||||||||||| |||||||| ||| ||| ||| ||||| || ||| Sbjct 1284 GCTTTTCTAAGAAAAGTCTACAGTATCCTTTCTCTGCAAGTTCTCTTAACTACAATGACA 1225 Query 188300 GCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACAAGGGAG 188349 ||||| | |||||||||||||| || ||||||||| |||| || || Sbjct 1224 TCTGCATTTTTTTTATACTTTGAGACTATACGGACATTTGTACATGGAAG 1175 >seq88670 Length=2616 Score = 82.4 bits (90), Expect = 1e-10 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 31299 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATCTGTACTATCTAGAGATTGTACTTCT 31356 ||| || || ||||| ||| ||| | ||| | ||| ||||| | ||| |||||| Sbjct 2336 TCCGGTGGAACCAAAACCTCCTGAACCCCTTTCCGTGTC--ATCTAAAACTTGAACTTCT 2393 Query 31357 TCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31416 || | ||||||| | | | | || | | || ||||| || |||| || || | || Sbjct 2394 TCTATTTCTGGACTAAAAACCCTTTCACAAATGAGCTGGGCAATTCGGTCACCCTTTTTG 2453 Query 31417 ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 31476 || | |||| | ||| ||| ||||| || | || || || ||||| ||||||||| Sbjct 2454 ACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACGCCAATATTTCCTCTATAATCT 2513 Query 31477 TCGTCTATTACACCGCCTCCTATATC 31502 || ||||| ||||| |||||||||| Sbjct 2514 TCATCTATGACACCAGCTCCTATATC 2539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628299172748160