Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq36395 120 3e-22 seq32041 120 3e-22 seq166013 96.9 3e-15 seq60851 86.0 6e-12 >seq36395 Length=32485 Score = 120 bits (132), Expect = 3e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 11652 CTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttt 11711 |||| ||||| || || |||||||| ||||| || | ||| ||||| | |||| ||| | Sbjct 15295 CTTCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 15354 Query 11712 ttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATG 11771 ||| ||| |||||||||||||| || ||||| ||||| ||||| || ||||| ||||| | Sbjct 15355 TTAACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 15414 Query 11772 CTACTACTCTTTCTCC 11787 | || || ||||| || Sbjct 15415 CCACCACCCTTTCCCC 15430 >seq32041 Length=12153 Score = 120 bits (132), Expect = 3e-22 Identities = 107/134 (80%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || |||||||| |||||||| | || ||||||| ||||||||| || Sbjct 9135 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9194 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| ||||| | ||||| |||||||||||||| ||||| ||||| || ||||| || Sbjct 9195 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGCC 9254 Query 11774 ACTACTCTTTCTCC 11787 || || | |||||| Sbjct 9255 ACGACACGTTCTCC 9268 >seq166013 Length=23081 Score = 96.9 bits (106), Expect = 3e-15 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| ||||| || || ||||| | || || |||||||| ||||| |||||||| Sbjct 8786 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATA 8727 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||| | | || |||| || || ||||||||||| || || || || | Sbjct 8726 GATTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 8667 Query 37258 CTATTTCTCAATCCAT 37273 |||||||| | |||| Sbjct 8666 CTATTTCTTATACCAT 8651 >seq60851 Length=21511 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 38413 GTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATTA 38472 || || || | ||| | || ||||| ||||| | |||||| | || || | | || Sbjct 9612 GTACCAGCATGAAAGAGAGTGGGAGAGGCATGGGTAAACCATCTCTCAGAAAGAAGGTTG 9671 Query 38473 TATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAGC 38532 |||||||| || || |||| ||||| | |||||| || | |||||||||||| ||| Sbjct 9672 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAGC 9731 Query 38533 ATATGTTGTGGTCTTTC 38549 || |||||||||||||| Sbjct 9732 ATGTGTTGTGGTCTTTC 9748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 467395233559680