Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq23463 170 3e-37 seq166013 152 7e-32 seq32041 114 2e-20 seq36395 111 2e-19 seq63341 102 1e-16 seq189111 100 4e-16 seq60851 100 4e-16 seq171033 91.5 2e-13 >seq23463 Length=40887 Score = 170 bits (188), Expect = 3e-37 Identities = 159/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || |||||| | ||||||||| | | ||||| || | ||| |||||||||||||||||| Sbjct 10718 TTTTTATTAACTGCTTCCAAAAACCGCAACAGGTGTATGAATAGATTGATGATATCCAAG 10659 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350 |||| || || | ||||| | || |||||||| || |||||||| || ||||||| Sbjct 10658 TAGAGGTTAATGGCAGCTAATATGTACTCTTCAGGGGACAGCTTATGCATCAGTGAGTAT 10599 Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410 ||||||||||| |||||||| ||||| | |||||| || | ||||| || ||||| ||| Sbjct 10598 GTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTAGAGCAGCCACGACCAATTCC 10539 Query 9411 ACTGTTTCACTTTGCACAAATA 9432 | ||| ||||| || | ||||| Sbjct 10538 ATTGTCTCACTATGAAAAAATA 10517 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| ||||||||||| || |||||||||||||| ||||| | ||||| Sbjct 4430 CCTGCTCCAAATTTGCTGAAATCTCTTTTAGATTGTAGAGTATACATAGTCAAACCAAGA 4371 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||| |||||||||| | |||||||||| | | || ||||||||||||||||| Sbjct 4370 AATACTCCAGTAGTCAGTACAAAAGCTTGCAGGATAATATATACATCATAGAAAGTAAC 4312 >seq166013 Length=23081 Score = 152 bits (168), Expect = 7e-32 Identities = 116/137 (85%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| | | Sbjct 8786 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATA 8727 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 || ||||||||||||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 8726 GATTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 8667 Query 65301 CTATTTCTAAGACCGTA 65317 |||||||| | ||| || Sbjct 8666 CTATTTCTTATACCATA 8650 >seq32041 Length=12153 Score = 114 bits (126), Expect = 2e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| |||||||| ||||| || ||||| || || || || | Sbjct 9133 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9192 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| || ||||| || ||||||||||| |||||||| ||||| ||||| | Sbjct 9193 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 9252 Query 36300 C 36300 | Sbjct 9253 C 9253 Score = 104 bits (114), Expect = 3e-17 Identities = 86/105 (82%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| || || ||||| | ||||| |||||||| ||||| |||||||| ||||| Sbjct 11153 ATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 11212 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 36522 ||||| || |||||||| || | ||| ||||||||||| ||||| Sbjct 11213 AATTTGGAAGCCGTAGAAGCAGCGAGCTTCGGTAATCTGAACTTC 11257 >seq36395 Length=32485 Score = 111 bits (122), Expect = 2e-19 Identities = 96/119 (81%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| ||||| | ||| |||||||| |||||||| ||||| || || | || || Sbjct 15297 TCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 15356 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 | ||| ||||| | ||||| |||||||| ||||||||||||||||| || |||||||| Sbjct 15357 AACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 15415 >seq63341 Length=12409 Score = 102 bits (112), Expect = 1e-16 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 65448 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 65507 || || ||||| || || || || || ||||||||||||||||| ||||||| |||||| Sbjct 8783 GCCAGATCACAGCTGGCTTCCAAGGCTCCGTAATAAATGGTTTCAAAGATCTGCTTATTC 8724 Query 65508 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAAT 65567 | || || || | || ||||| ||||| | | |||||||| || |||||||| Sbjct 8723 AATAACTGAGCCTCTGGACTCTCAAAAGGATATCTCATCAGAATAAAAGCATCTGCTAAA 8664 Query 65568 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 65608 ||||| || ||||| || || || | ||| | ||||| || Sbjct 8663 CCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 8623 >seq189111 Length=3744 Score = 100 bits (110), Expect = 4e-16 Identities = 64/70 (91%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| |||||||| ||||| || |||||||| |||||||||||||||| Sbjct 65 CCATTCGGATGTGCACGCTGGCAGAGGCCACGGAACTGCCATAATTGAAGTCGTCCTCGA 124 Query 9907 TGGAGGAGCA 9916 |||||||||| Sbjct 125 TGGAGGAGCA 134 >seq60851 Length=21511 Score = 100 bits (110), Expect = 4e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 66059 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATG 66118 |||||||||||| |||||||| |||||||||||||| | || | ||| |||| | || Sbjct 2454 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTG 2513 Query 66119 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGG 66178 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 2514 CTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGG 2573 Query 66179 TTCCAAGTATATGGC 66193 |||||||| || || Sbjct 2574 CTCCAAGTAAATAGC 2588 >seq171033 Length=4788 Score = 91.5 bits (100), Expect = 2e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 9738 CTCCCTTGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAGTTGTTGCCGTT 9797 || || |||| || | |||| || |||||||||||||| | ||||| ||| || Sbjct 1175 CTTCCATGTACAAATGTCCGTATAGTCTCAAAGTATAAAAAAAATGCAGATGTCATTGTA 1234 Query 9798 GTTAAAAGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847 ||||| |||| ||| ||| ||||||||| |||||||||||||||||| || Sbjct 1235 GTTAAGAGAACTTGCAGAGAAAGGATACTGTAGACTTTTCTTAGAAAAGC 1284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 656586011196480