Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq110923 129 5e-25 seq167087 104 2e-17 seq179715 93.3 4e-14 >seq110923 Length=21527 Score = 129 bits (142), Expect = 5e-25 Identities = 125/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 |||||||||| ||| ||||||| || || || |||| ||||||||||||||| || || Sbjct 6259 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 6200 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || || ||||||||||| || |||||||| |||||||| ||||| ||||| || || Sbjct 6199 ACACCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGACAGGATAGCTCACCGTTTACC 6140 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 || || ||||| || | | || || ||||| || ||||| Sbjct 6139 ACATAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCAT 6099 >seq167087 Length=6633 Score = 104 bits (114), Expect = 2e-17 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 20952 TGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATC 21011 || || || ||||| ||| | ||||||| | || ||||| | ||| ||| | |||| Sbjct 2946 TGTGCATCTCCCAAAGTGGGTACAAAGTTATCTGGCTTCAGGTTCATGATGTGTGTGATC 3005 Query 21012 AGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCG 21071 | || || || |||| |||| ||||| |||| || | || || |||||||||| || Sbjct 3006 ATGTAGGTGAGAAGGGAGTAGGTGGCGGTGTTTAAGGACACACCTAGGCCCATGTTGGTT 3065 Query 21072 GACCTCTGGTACAGCTGGCAGGACAGCTCCCC 21103 |||| |||||| ||||||||||||||||| || Sbjct 3066 GACCACTGGTATAGCTGGCAGGACAGCTCACC 3097 >seq179715 Length=1504 Score = 93.3 bits (102), Expect = 4e-14 Identities = 120/163 (74%), Gaps = 7/163 (4%) Strand=Plus/Minus Query 20989 TCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACG 21048 ||||||| | || |||||||||| || || || |||| |||||||| || || Sbjct 238 TCAGGCCTG-GATGTGAGCGATCGTGTAGGTGAGCAGGGAGTAGCTGGTGAG--TA---- 186 Query 21049 GGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAG 21108 | || || ||||||||||| || |||||||| |||||||||||||| ||||| | Sbjct 185 GCACACCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGGCAGGATAGCTCACTGTTCA 126 Query 21109 CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||||||| ||||| || | | || || ||||| || ||||| Sbjct 125 CCACGTAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCAT 83 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426770457970560