Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq166013 143 4e-29 seq32041 125 1e-23 seq63341 116 5e-21 seq60851 107 3e-18 seq36395 107 3e-18 seq88670 84.2 3e-11 >seq166013 Length=23081 Score = 143 bits (158), Expect = 4e-29 Identities = 114/137 (83%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| |||||||||||||| |||||||| ||||| | Sbjct 8786 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATA 8727 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 |||||||||||||||| ||| ||||||||||| || || ||||| || || | | |||| Sbjct 8726 GATTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 8667 Query 79180 CTATTTCTAAGACCGTA 79196 |||||||| | ||| || Sbjct 8666 CTATTTCTTATACCATA 8650 >seq32041 Length=12153 Score = 125 bits (138), Expect = 1e-23 Identities = 102/124 (82%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 9133 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9192 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | ||||| ||||| || ||||| || |||||||||||||||||||| ||||| ||||| | Sbjct 9193 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 9252 Query 50102 CAAC 50105 | || Sbjct 9253 CCAC 9256 Score = 100 bits (110), Expect = 4e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||||| ||||| || || | ||||| |||||||| ||||| |||||||| ||||| Sbjct 11153 ATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 11212 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324 || || || |||||||| || | ||| ||||||||||| ||||| Sbjct 11213 AATTTGGAAGCCGTAGAAGCAGCGAGCTTCGGTAATCTGAACTTC 11257 >seq63341 Length=12409 Score = 116 bits (128), Expect = 5e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 79299 GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTA 79358 ||| |||||||| || || | | || ||| | ||||| || || || || |||||||| Sbjct 8811 GTAGGTTTCATATGGGCCATGTTCTTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCGTA 8752 Query 79359 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATA 79418 |||||||||||| || |||| |||||| | || || ||| | || ||||| ||||| Sbjct 8751 ATAAATGGTTTCAAAGATCTGCTTATTCAATAACTGAGCCTCTGGACTCTCAAAAGGATA 8692 Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478 | | |||||||| || |||||||| ||||| || ||||| || || || | ||| | Sbjct 8691 TCTCATCAGAATAAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGGCGATGGCG 8632 Query 79479 CTTATTAGA 79487 ||||| || Sbjct 8631 TTTATTTGA 8623 >seq60851 Length=21511 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| |||||||||||||| | || ||||| |||| | ||| Sbjct 2455 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTGC 2514 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 2515 TCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 2574 Query 80059 TCCAAGTATATGGC 80072 |||||||| || || Sbjct 2575 TCCAAGTAAATAGC 2588 >seq36395 Length=32485 Score = 107 bits (118), Expect = 3e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 49984 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 50043 || ||||| ||||| ||||| |||||||| |||||||| ||||| || || | || || Sbjct 15297 TCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 15356 Query 50044 AGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCA 50103 | ||| ||||| | ||||| || ||||| ||||| ||||||||||| || |||||||| Sbjct 15357 AACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGGCC 15416 Query 50104 AC 50105 || Sbjct 15417 AC 15418 >seq88670 Length=2616 Score = 84.2 bits (92), Expect = 3e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 47703 TCCAGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCCTC 47762 ||| || || ||||| ||| | || || || || ||||| | ||| ||||| || Sbjct 2336 TCCGGTGGAACCAAAACCTCCTGAACCCCTTTCCGTGTCATCTAAAACTTGAACTTCTTC 2395 Query 47763 CAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTAC 47822 | ||||||| | | | | || | | || ||||| || |||| || ||| | || || Sbjct 2396 TATTTCTGGACTAAAAACCCTTTCACAAATGAGCTGGGCAATTCGGTCACCCTTTTTGAC 2455 Query 47823 ATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTC 47882 | ||| | ||| ||| ||||| || | || || || ||||| ||||||||||| Sbjct 2456 TTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACGCCAATATTTCCTCTATAATCTTC 2515 Query 47883 GTCTATTACACCACCTCCTATATC 47906 ||||| |||||| |||||||||| Sbjct 2516 ATCTATGACACCAGCTCCTATATC 2539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716537125750080