Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq36395 111 1e-19 >seq36395 Length=32485 Score = 111 bits (122), Expect = 1e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232 |||||||||| || || || || || ||||| || || || |||||||| |||| ||| | Sbjct 15295 CTTCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 15354 Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292 | | ||| |||||||||||||| || || || || || |||||||| || || ||||| | Sbjct 15355 TTAACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 15414 Query 13293 CTATCAACCTTTCACC 13308 | | || |||||| || Sbjct 15415 CCACCACCCTTTCCCC 15430 Score = 93.3 bits (102), Expect = 4e-14 Identities = 68/79 (86%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922 |||||||| ||||| ||| ||||| || ||||||||||||||||| ||||| |||||| Sbjct 6925 TGATATTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 6984 Query 12923 ATAAAATCGAAAGGATTTT 12941 |||||||| || ||||||| Sbjct 6985 ATAAAATCAAAGGGATTTT 7003 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 12970 TTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCAT 13029 ||||| | |||||||||||| |||||||| || ||||||||||| ||| |||| ||||| Sbjct 10868 TTCTACAAGCAATCTGTCAGCTACAAACTCAATATACTGTTTCATCAAAACACAATTCAT 10927 Query 13030 TCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAA 13065 ||| || | || |||| ||||| |||||||| Sbjct 10928 TCCAATGAGCCCAACTGGCAATGCTTCCGTTAAAAA 10963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429969320918544