Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq164519 158 3e-33 seq40632 152 1e-31 seq184519 141 2e-28 seq55580 136 9e-27 seq118833 125 2e-23 seq36395 120 7e-22 seq164713 107 4e-18 seq141718 100 7e-16 seq107247 95.1 3e-14 seq36028 95.1 3e-14 >seq164519 Length=6375 Score = 158 bits (174), Expect = 3e-33 Identities = 157/201 (78%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| ||||| ||||| || |||||||| || || || ||||||||||| || ||| Sbjct 1294 GTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGTCCATCTTCTAGTTGCTTGCCA 1353 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || || || ||||||||||| ||| |||| |||||||| ||||| || ||| Sbjct 1354 GCAAAGATCAGTCTTTGCTGATCAGGAGGAATT-CTTCCTTATCCTGGATCTTGGCCTTT 1412 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| ||||| ||||| ||||| || || || ||||| || ||||| ||| Sbjct 1413 ACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGTGATGGTCTT-CCTGTAAGGGTT 1471 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| | |||| ||| Sbjct 1472 TTCACAAAACTTGGCATCTTG 1492 >seq40632 Length=8250 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | |||| || || ||||| || |||||||| | ||| | | ||||| Sbjct 8022 ACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCTATCTTCC 7963 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 |||||||| ||||||||||| || || || ||||||||||| |||||||| || || || Sbjct 7962 AGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGG 7903 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||| || ||||||||||||| | ||| | |||| |||| || || |||||||| Sbjct 7902 ATCTTGGCCTTTACATTTTCTATTGCATCTGAAAGTTCAGCCTCAAGAGTGATAGTCTTC 7843 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 | | ||| ||||| | || ||||||||||| Sbjct 7842 CTTGCAAGGGTTTTAATGAAAATCTGCATTTT 7811 >seq184519 Length=2203 Score = 141 bits (156), Expect = 2e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||| || || ||||| || |||||||| || || | || || || ||||| || ||| Sbjct 1424 GTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCCATCCTCCAGTTGCTTGCCA 1483 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || || || ||||||||||| |||||||| || || || ||||| || ||| Sbjct 1484 GCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGGATCTTGGCCTTT 1543 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||||||| ||||| |||| ||||| || | || ||||| || |||| ||| Sbjct 1544 ACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGATGGTCTTCCCCATAAGGGTT 1603 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| |||||||| ||| Sbjct 1604 TTCACAAAAATCTGCATCTTG 1624 >seq55580 Length=18577 Score = 136 bits (150), Expect = 9e-27 Identities = 148/193 (77%), Gaps = 5/193 (3%) Strand=Plus/Minus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 ||| |||| ||||| || |||||| || || | |||||||| |||||||| |||| Sbjct 4088 GATCCTTT-TGAATGTTGTAGTCA---AG-GTACATCCGTCTTCCAGTTGTTTGCCAGTG 4034 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 || || || || || ||| |||||| |||| ||| || || |||||||| || |||||| Sbjct 4033 AAGATCAGTCTTTGCCGATGAGGAGGAATTCTTTCCTTTTCTTGAATCTTGGCCTTTACA 3974 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 |||||||| ||||| ||||| ||||| || || || |||| || ||||| ||||| Sbjct 3973 TTTTCTACTGTATCCAAGGGTTCAACCTCGAGAGTGATGATCTTCCCTGTAAGGGTTTTC 3914 Query 104546 ACAAATATCTGCA 104558 ||||| ||||||| Sbjct 3913 ACAAAAATCTGCA 3901 >seq118833 Length=5824 Score = 125 bits (138), Expect = 2e-23 Identities = 148/201 (74%), Gaps = 11/201 (5%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 ||||| || | ||||| || |||||||| || || || ||||| ||||| || ||| Sbjct 885 GTAGACTCCCTTTGAATGTTGTAGTCAGACAGGGTATGTCCATCTTCCAGTTGCTTGCCA 826 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| | | ||||||||| |||||||| ||||| || ||||| || ||| Sbjct 825 GCAAAGACCA----------ATCAGGAGGAATTCCTTCCTTATCTTGGATCTTGGCCTTT 776 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 |||||||||| ||||| ||||| ||||| || || || | ||| || ||||| ||| Sbjct 775 ACATTTTCTATTGTATCTGACGGTTC-ACCTCAAGAGTGATGGCCTTCCCTGTAAGGGTT 717 Query 104543 TTTACAAATATCTGCATTTTG 104563 || ||||| |||||||| ||| Sbjct 716 TTCACAAAAATCTGCATCTTG 696 >seq36395 Length=32485 Score = 120 bits (132), Expect = 7e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 269126 GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCC 269185 || |||||| | || || ||||| ||||||||||| || ||||| || || |||||||| Sbjct 15430 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCTGGATCTTTTGCT 15371 Query 269186 GCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTG 269245 ||||| || ||||| ||||||||||| |||||||| ||| | || || || || ||| | Sbjct 15370 GCTATATTCTGGTTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTC 15311 Query 269246 ATAAGCAGGGACGAAG 269261 || ||||| || |||| Sbjct 15310 ATTAGCAGAGATGAAG 15295 >seq164713 Length=27120 Score = 107 bits (118), Expect = 4e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 78494 TGGTGGTATTATATCTCTAAAGGAATAGAATACCTAGATACTATCTTCTTCATCCTACGA 78553 |||||||| | ||| ||||||||||| || || | || || | || || ||||| | Sbjct 24946 TGGTGGTACTTTATATCTAAAGGAATTGAGTATTTGGACACAGTGTTTTTTATCCTGAGG 24887 Query 78554 AAGAAATTTAATCAAATTAGTTTTCTACATGTATATCATCATTTTACTATGTTTACTTTG 78613 |||||| || ||| | ||| || |||||||| ||||| | ||| |||||||| ||| Sbjct 24886 AAGAAAAACAACCAAGTCTCTTTCCTTCATGTATACCATCACTGTACAATGTTTACATTG 24827 Query 78614 GGATGGATAGGTATTAAATGGTTCGCAGGAGGACAAG 78650 | ||||| || ||||| ||| ||||||| ||||||| Sbjct 24826 TGGTGGATTGGAATTAAGTGGGTCGCAGGGGGACAAG 24790 >seq141718 Length=16494 Score = 100 bits (110), Expect = 7e-16 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 104366 GATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCA 104425 || |||| ||| ||||||||||| || ||||| | || || || || ||||| || ||| Sbjct 9476 GACTCTTCCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCTGCA 9417 Query 104426 AAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACA 104485 ||| | || ||| || ||||| || || || || || || || || || ||||| ||| Sbjct 9416 AAACTCAGATGCTGCTGCTCAGGTGGAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACA 9357 Query 104486 TTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTT 104545 | || | |||| | ||||| ||||| ||||| | |||||| | | || || || Sbjct 9356 TCCTCAATACTATCACCGGGTTCAACCTCAAGTGTGGTGGTCTTAGCTGGCAGGGTCTTC 9297 Query 104546 ACAAATATCT 104555 ||||| |||| Sbjct 9296 ACAAAGATCT 9287 >seq107247 Length=7366 Score = 95.1 bits (104), Expect = 3e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 65773 ACTCCTCCTTACCGAAATTAAATATTAATATTCCAACATTACCTCTATAGTCTGAATCTA 65832 |||| || || || |||||||| | || | |||| ||| |||||||||||| | ||| Sbjct 131 ACTCTTCTTTGCCAAAATTAAACAGTACAACACCAATATTTCCTCTATAGTCTTCAACTA 190 Query 65833 TAACACCAGCACCTACATCTATAAAGTAATTATACGCTAATCCAGATCGGGGAGCTATTC 65892 | |||||||| ||||||||||| ||||| || || || ||||| || ||||||| || Sbjct 191 TGACACCAGCTCCTACATCTATGAAGTATTTTGCAGCCAAGCCAGAACGTGGAGCTACTC 250 Query 65893 TACCATA 65899 | || || Sbjct 251 TTCCGTA 257 >seq36028 Length=1690 Score = 95.1 bits (104), Expect = 3e-14 Identities = 101/131 (77%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 104435 CTCTGTTGATCAGGAGG--TATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTA 104492 || || |||||||||| |||||||| ||||| |||||||| || |||||||||||| Sbjct 1533 CTTTGCTGATCAGGAGAAATATTCCTTTCTTATCTTGAATCTTGGCCCTTACATTTTCTA 1474 Query 104493 CGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATA 104552 ||||| ||||| | ||| || || || ||||| || ||||| ||||| ||||| | Sbjct 1473 TTGTATCTAAGGGTTC-AACTCAAGAGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAA 1415 Query 104553 TCTGCATTTTG 104563 ||| ||| ||| Sbjct 1414 TCTCCATCTTG 1404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1148553095937376