Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq55711 105 6e-18 seq184519 95.1 1e-14 >seq55711 Length=2414 Score = 105 bits (116), Expect = 6e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||| |||| || || || || || | ||||||||| | ||| | | ||||||| Sbjct 2084 ACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCCTCC 2143 Query 94859 AGCTGTTTTCC-GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| || || ||| || | | ||||| || || ||||| || || ||||| | Sbjct 2144 AGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 2203 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 ||||| || ||||| | | ||||||| | | || || |||| ||||| || || Sbjct 2204 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGTCTT 2263 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || || ||||||||||||||||| Sbjct 2264 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq184519 Length=2203 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 94791 ATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG 94850 ||| |||| | | ||| | ||||| |||||||| | ||| || || || || Sbjct 1404 ATCTCAACGCAAGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTC 1463 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||||||||| || || || ||||||| | |||||||||||| |||||||| ||||| | Sbjct 1464 CATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 1523 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 | || | || || ||||| || | || || | | || || |||| | || Sbjct 1524 TTTCTTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGA 1583 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || || |||| ||||||||||| |||||||| Sbjct 1584 TGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 1620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447210414745920