Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq166013 149 8e-31 seq32041 123 3e-23 seq36395 116 5e-21 seq60851 104 3e-17 seq63341 96.9 4e-15 seq88670 82.4 9e-11 >seq166013 Length=23081 Score = 149 bits (164), Expect = 8e-31 Identities = 115/137 (84%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| |||||||||||||| |||||||||||||| | Sbjct 8786 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATA 8727 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 || ||||||||||||| ||| ||||||||||| ||||| ||||| || || | | |||| Sbjct 8726 GATTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAA 8667 Query 62457 CTATTTCTAAGACCGTA 62473 |||||||| | ||| || Sbjct 8666 CTATTTCTTATACCATA 8650 >seq32041 Length=12153 Score = 123 bits (136), Expect = 3e-23 Identities = 100/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| ||||| |||||||| ||||| || ||||| || || || || | Sbjct 9133 CCTCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 9192 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| ||||| || || || || |||||||||||||||||||| ||||||||||| | Sbjct 9193 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAG 9252 Query 33446 C 33446 | Sbjct 9253 C 9253 Score = 100 bits (110), Expect = 4e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||||||| ||||| || || | ||||| |||||||| ||||| |||||||| ||||| Sbjct 11153 ATCTTTAATGTAAGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 11212 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 || || || |||||||| || | ||| ||||||||||| ||||| Sbjct 11213 AATTTGGAAGCCGTAGAAGCAGCGAGCTTCGGTAATCTGAACTTC 11257 >seq36395 Length=32485 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| ||||| ||||| |||||||| |||||||| ||||| || || | || || Sbjct 15297 TCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 15356 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 | ||| ||||| | ||| || |||||||| ||||| ||||||||||| ||||||||||| Sbjct 15357 AACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 15415 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 33686 CCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33745 |||||||||||||||| ||||| |||||||| |||||||| || || | || |||| Sbjct 21440 CCAAATTTTCATTCACAATTCCATCACTGGCAGCAAAAAAGGCTAAGATGTGAGAGATAA 21499 Query 33746 AATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATA 33796 ||||||| || |||||| | ||| | ||||| | | || ||| || |||| Sbjct 21500 AATATTTCTCATCTGGTTTAAGTCTGTTCCAGTGAGGGAGATCCTTTGATA 21550 >seq60851 Length=21511 Score = 104 bits (114), Expect = 3e-17 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 63215 CACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATG 63274 |||||||||||| |||||||| |||||||||||||| | || ||||| |||| | || Sbjct 2454 CACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTG 2513 Query 63275 TTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGG 63334 || || |||||||| ||||| || | ||| || ||| | | || || ||||||| || Sbjct 2514 CTCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGG 2573 Query 63335 TTCCAAGTATATGGC 63349 |||||||| || || Sbjct 2574 CTCCAAGTAAATAGC 2588 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 ||||||| | ||| |||||||| || || | || || || || || || || || |||| Sbjct 14103 CACTAAACACTTTCTTTGTTTCTTTATGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAA 14162 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 14163 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 14222 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 ||| || || || || ||| | |||| ||||| || || ||||| Sbjct 14223 GTTCCACGGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 14268 >seq63341 Length=12409 Score = 96.9 bits (106), Expect = 4e-15 Identities = 118/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 62604 GCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTT 62663 || || ||||| || || || || || ||||||||||||||||| ||||||| |||||| Sbjct 8783 GCCAGATCACAGCTGGCTTCCAAGGCTCCGTAATAAATGGTTTCAAAGATCTGCTTATTC 8724 Query 62664 AGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCCGCTAAT 62723 | || || || | || ||||| ||||| | | |||||||| || || ||||| Sbjct 8723 AATAACTGAGCCTCTGGACTCTCAAAAGGATATCTCATCAGAATAAAAGCATCTGCTAAA 8664 Query 62724 CCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGA 62764 ||||| || ||||| || || || | ||| | ||||| || Sbjct 8663 CCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 8623 >seq88670 Length=2616 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 31047 TCCTGTTGATCCAAACCCT--TGATCTCCTCTATTTGTACTATCTAGAGATTGTACTTCT 31104 ||| || || ||||| ||| ||| | ||| | ||| ||||| | ||| |||||| Sbjct 2336 TCCGGTGGAACCAAAACCTCCTGAACCCCTTTCCGTGTC--ATCTAAAACTTGAACTTCT 2393 Query 31105 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCAGTATTT 31164 || | ||||||| | | | | || | | || ||||| || |||| || || | || Sbjct 2394 TCTATTTCTGGACTAAAAACCCTTTCACAAATGAGCTGGGCAATTCGGTCACCCTTTTTG 2453 Query 31165 ACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 31224 || | |||| | ||| ||| ||||| || | || || || ||||| ||||||||| Sbjct 2454 ACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACGCCAATATTTCCTCTATAATCT 2513 Query 31225 TCGTCTATTACACCGCCTCCTATATC 31250 || ||||| ||||| |||||||||| Sbjct 2514 TCATCTATGACACCAGCTCCTATATC 2539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621445336595520