Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq60851 87.8 5e-12 seq32041 87.8 5e-12 >seq60851 Length=21511 Score = 87.8 bits (96), Expect = 5e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 ||||| |||||||| || | |||||| ||| || || |||||||||||||| | Sbjct 2597 GGGGCATTTGCTATTTACTTGGAGCCTTGGCATTTAGACATCTTTGAGTTTCTTGATTTA 2538 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| |||||||| || |||||| | ||||| |||| ||| |||||| || Sbjct 2537 AAGAAGAACACAGGAAAAGAAGAGCAGCGTGCCAGGGATCTTTTCTTTGCTCTTTGGATT 2478 Query 363958 TCTGACCATTTTATGAAGCGCGTGGA 363983 | || | || ||||| || ||||| Sbjct 2477 CCAGATCTCTTCATGAAACGAGTGGA 2452 >seq32041 Length=12153 Score = 87.8 bits (96), Expect = 5e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 |||||| | | || ||||||| || ||||| || ||||||||||| | ||| || Sbjct 9265 GAACGTGTCGTGGCTTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCA 9206 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || || ||||| || ||||| | | | ||||| || || || ||||| ||||| | ||| Sbjct 9205 ATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATT 9146 Query 22609 AGCCGAGATGAGG 22621 ||| ||||||||| Sbjct 9145 AGCAGAGATGAGG 9133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300132788425904