Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq55711 104 2e-17 seq178408 82.4 6e-11 >seq55711 Length=2414 Score = 104 bits (114), Expect = 2e-17 Identities = 163/230 (71%), Gaps = 5/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | ||||||| |||||| |||||||| || || ||||| || || | Sbjct 2066 CCACCCCGTAGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 2125 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGC-ATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | | ||||||| ||||||||||| | |||| || ||||| ||||| || Sbjct 2126 AGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGG 2185 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | |||||| ||||| || || ||| || || | | | |||||| | |||||| Sbjct 2186 AATGCCCTCCTTGTCTTGGATTTTAGCT--TTGACATTCTCAATAGTGTCACTGGGCTCA 2243 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | ||||| || || || ||||| || || ||||| |||||||| Sbjct 2244 ACCTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq178408 Length=1377 Score = 82.4 bits (90), Expect = 6e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786 |||| ||||| |||||| | || || ||||| |||| | | || | | |||||| Sbjct 1144 ACCAAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAGAGTGCGGCCATCCTCC 1085 Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC-GGC 16845 | ||||||||||| |||| || ||||| ||||| ||| |||||||| ||||| || Sbjct 1084 AGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGACGCCCTCCTTGTCTTGC 1025 Query 16846 AATTT-GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTT 16904 | ||| ||| || || | | |||||| | |||||| || | ||| |||| | Sbjct 1024 ATTTTAGCT--TTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGGTGGTCT 967 Query 16905 TTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||| || || ||||| ||||||| Sbjct 966 TTTCTATCAGGGTCTTTACAAAGGTCTGCAT 936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404135789007280