Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq55711 104 2e-17 seq98110 82.4 7e-11 >seq55711 Length=2414 Score = 104 bits (114), Expect = 2e-17 Identities = 155/216 (72%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| || || | |||||| | || || ||| | | Sbjct 2293 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATCACACTTGAGGTTGAGCCCAGT 2234 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 |||||||| ||| | || |||| |||| || ||||| || || |||||||||||| Sbjct 2233 GACACTATTGAG--AATGTCAAAGCTAAAATCCAA-GACAAGGAGGGCATTCCACCTGAC 2177 Query 25116 CAACAGCGGATTA-TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| | | ||||||| |||||||| | || |||| | ||| | ||||| Sbjct 2176 CAGCAGCGTCTGATTTTTTGCGGGCAAACAGCTGGAGGATGGCCATACTCTCTCAGATTA 2117 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||| ||||| || ||||| || || Sbjct 2116 TAACATCCAGAAAGAGTCCACCCTGCATTTGGTACT 2081 >seq98110 Length=40326 Score = 82.4 bits (90), Expect = 7e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142 |||||| ||||| || || |||||||||||||| ||||| | |||| ||| |||||| Sbjct 16593 AAAATCCAAGACAAGGAGGGCATTCCACCTGACCAGCAGCGTCTGATTTCTGCGGGCAAA 16534 Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202 || | || |||| |||||| | ||||| || || || ||||| ||||| || || Sbjct 16533 CAGCTGGAGGATGGCCGCACTCTCTCAGATTATAACATCCAGAAAGAGTCCACCCTGCAC 16474 Query 25203 TTAGTGCT 25210 || || || Sbjct 16473 TTGGTACT 16466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432309407286680