Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq55711 131 1e-25 seq98110 114 1e-20 seq141718 98.7 8e-16 seq184519 93.3 4e-14 seq164519 91.5 1e-13 seq178408 89.7 4e-13 >seq55711 Length=2414 Score = 131 bits (144), Expect = 1e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 2295 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATCACACTTGAGGTTGAGCCCA 2236 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || || | || || ||||| ||||| |||||||||||||| |||||||| || | Sbjct 2235 GTGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACC 2176 Query 22337 AACAACGTCTTA-TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 | || ||||| | | ||||| ||||||||| | |||||| || || |||| ||||| Sbjct 2175 AGCAGCGTCTGATTTTTTGCGGGCAAACAGCTGGAGGATGGCCATACTCTCTCAGATTAT 2116 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGT 22427 ||||| || ||||| |||||| | ||||| || Sbjct 2115 AACATCCAGAAAGAGTCCACCCTGCATTTGGT 2084 >seq98110 Length=40326 Score = 114 bits (126), Expect = 1e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| |||||||||||||| |||||||| || || || ||||| || | ||| |||||| Sbjct 16593 AAAATCCAAGACAAGGAGGGCATTCCACCTGACCAGCAGCGTCTGATTTCTGCGGGCAAA 16534 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | |||||| |||||| |||| ||||| ||||| || ||||| |||||| | || Sbjct 16533 CAGCTGGAGGATGGCCGCACTCTCTCAGATTATAACATCCAGAAAGAGTCCACCCTGCAC 16474 Query 22423 TTAGTTTTGCGATTGCGCGGAGG 22445 || || | || |||| || || Sbjct 16473 TTGGTACTTCGTCTGCGGGGTGG 16451 >seq141718 Length=16494 Score = 98.7 bits (108), Expect = 8e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 22257 CACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAA 22316 ||| ||||| || ||| || |||| | || ||| ||||| ||||| |||||||| Sbjct 9321 CACACTTGAGGTTGAACCCGGTGATAGTATTGAGGATGTCAAAGCTAAAATCCAAGACAA 9380 Query 22317 GGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCA 22376 |||||| |||||||| || || || | ||| | ||||| ||||||||| | |||||| Sbjct 9381 GGAGGGCATTCCACCTGAGCAGCAGCATCTGAGTTTTGCAGGCAAACAGCTGGAGGATGG 9440 Query 22377 CCGCACCGTCTCCGATTACAACATTCAAAAAGAATCC 22413 |||||| |||| || || || || || |||| ||| Sbjct 9441 CCGCACTCTCTCAGACTATAATATCCAGGAAGAGTCC 9477 >seq184519 Length=2203 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| |||||||| ||||| | | || || || || ||||||| || ||| Sbjct 1623 AAGATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCCCTCTTGAGGTTGAACTG 1564 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| || || | || || || ||||| ||||| || ||||| || ||| Sbjct 1563 TCAGATACAACAGAAAATGTAAAGGCCAAGATCCAAGAAAAGGAAGGAATTCCTCCTGAT 1504 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || | |||||| || ||| | || || ||| Sbjct 1503 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAGGATGGACGTACCCTGTCTGACTAC 1444 Query 22396 AACATTCAAAAAGA 22409 ||||||||||| || Sbjct 1443 AACATTCAAAAGGA 1430 >seq164519 Length=6375 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 ||||||| || |||||| ||||| | || || || || |||||||||| || ||| || Sbjct 1491 AAGATGCCAAGTTTTGTGAAAACCCTTACAGG-AAGACCATCACTCTTGAGGTTGAACCC 1433 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 ||||| | || || | || || || || || ||||| | ||||| || ||| Sbjct 1432 TTAGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGA-ATTCCTCCTGAT 1374 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||||| ||||| || |||| ||| | ||| | || || ||| Sbjct 1373 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTAGAAGATGGACATACCCTGTCTGACTAC 1314 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 || ||||||||||| || ||| | || | || ||| || Sbjct 1313 AAAATTCAAAAAGAGTCTACCCTTCACCTTGTGTTGAGA 1275 >seq178408 Length=1377 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 22292 ATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATAT 22351 || ||||| ||||| |||||||||||||| | || || || || || ||||| || | Sbjct 1009 ATGTCAAAGCTAAAATGCAAGACAAGGAGGGCGTCCCTCCTGACCAGCAGCGTCTGATTT 1068 Query 22352 TTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAAT 22411 | || ||||||||| | |||||| |||||| |||| || | ||||| || |||| | Sbjct 1069 TGGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCGGACTGTAACATCCAGAAAGCGT 1128 Query 22412 CCACCATACATTTAGTTTT 22430 ||||| | || || || || Sbjct 1129 CCACCCTGCACTTGGTGTT 1147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418741375820680