Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq55711 98.7 1e-15 seq184519 95.1 1e-14 seq164519 95.1 1e-14 seq98110 91.5 1e-13 seq55580 86.0 6e-12 seq40632 86.0 6e-12 seq57523 84.2 2e-11 >seq55711 Length=2414 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || | ||| | || || ||||| || ||||| ||||||| || || | | || Sbjct 2080 AAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATC 2139 Query 64291 TTCAAGCTGCTTGCCGGCATAAA-TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 || ||||| ||||| ||| ||| | || ||||||||||| || ||||| || || || | Sbjct 2140 CTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGT 2199 Query 64350 CTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408 |||| | |||| ||||| ||| ||| | || |||| || || || || | || | Sbjct 2200 CTTGGA-TTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATA 2258 Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||||| |||| || || || || || ||||| Sbjct 2259 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq184519 Length=2203 Score = 95.1 bits (104), Expect = 1e-14 Identities = 162/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || || |||| | | | || |||| || | || |||||||||||||| || | Sbjct 1393 ACCACCCCGACATCTCAACGCAAGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGA 1452 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| || | || || || |||||||| ||| | || || | ||||| || ||||| Sbjct 1453 CAGGGTACGTCCATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 1512 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATC--ACCGGCGTCC 64393 ||||||||| |||||||| || || ||||||| || |||||| || | || Sbjct 1513 AATTCCTTCCTTTTCTTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGACAG--TTCA 1570 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || || | || | |||||| || | | ||||| || ||||| ||||| || Sbjct 1571 ACCTCAAGAGGGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATCTT 1623 >seq164519 Length=6375 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| || |||| || || ||||||||||| ||||| || | | ||| | | Sbjct 1275 TCTCAACACAAGGTGAAGGGTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGTCC 1334 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || |||||||| ||| | || || | ||||| || ||||||||| |||| || Sbjct 1335 ATCTTCTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATT-CTTCCTT 1393 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 || || || || ||||||| || | |||||| || || || || | ||| | Sbjct 1394 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGTGAT 1453 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || || | ||||| || ||| || |||| || Sbjct 1454 GGTCTT-CCTGTAAGGGTTTTCACAAAACTTGGCATCTT 1491 >seq98110 Length=40326 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || ||||| ||||||| || ||||| | || || ||||| ||||| Sbjct 16481 GTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTGCCC 16540 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| |||| || ||||||||||| || ||||| || || || ||||| ||||| Sbjct 16541 GCAGAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTT 16593 >seq55580 Length=18577 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| || |||| | | | || |||||||||||||| || | ||| | | Sbjct 4111 TCTCAACACAAGGTGAAGCATAGGATCCTTTTGAATGTTGTAGTC----AAGGTACATCC 4056 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 |||||| || || ||||| | | || || | ||| | | |||||||||| ||| || Sbjct 4055 GTCTTCCAGTTGTTTGCCAGTGAAGATCAGTCTTTGCCGATGAGGAGGAATTCTTTCCTT 3996 Query 64348 TTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTAC 64407 |||||| || || ||||||| || |||||||| || || || || | ||| | Sbjct 3995 TTCTTGAATCTTGGCCTTTACATTTTCTACTGTATCCAAGGGTTCAACCTCGAGAGTGAT 3936 Query 64408 GGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCA 64442 | |||| || || | ||||| || ||||| |||| Sbjct 3935 GATCTTCCCTGTAAGGGTTTTCACAAAAATCTGCA 3901 >seq40632 Length=8250 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 64228 TCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGC 64287 ||| | ||| ||||||| | || || |||||||||||||| || | | || | Sbjct 8029 TCTCAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCT 7970 Query 64288 GTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTT 64347 ||||| || || ||||| ||| |||| || | ||||| || |||||||||||||| || Sbjct 7969 ATCTTCCAGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 7910 Query 64348 TTCTTGTATTTTTTGCTTTACA 64369 |||||| || || ||||||| Sbjct 7909 TTCTTGGATCTTGGCCTTTACA 7888 >seq57523 Length=7438 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 || |||| || || || ||||||||||||| || | | ||| | | ||||| || Sbjct 3306 AGGTGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAGACAGGGTATGTCCATCTTCCAGT 3247 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| ||| | || || | ||| | || ||||||||||||| ||| ||||| || Sbjct 3246 TGCTTGCCAGCAAAGATCAGTCTTTGCGGATCAGGAGGAATTCCTTTTTTATCTTGAATC 3187 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||||||| || |||||| || || | || | ||| | |||||| || Sbjct 3186 TTGGCCTTTACATTATCAGTTGTATCTAAGGGTTCAGCCTCAAAAGTGAAGGTCTTCCCC 3127 Query 64418 GTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | | ||||| || ||||| | ||| || Sbjct 3126 ATAAGGGTTTTCACAAAAATCTCCATCTT 3098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498440206351680