Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq88220 161 1e-34 >seq88220 Length=24501 Score = 161 bits (178), Expect = 1e-34 Identities = 205/282 (73%), Gaps = 0/282 (0%) Strand=Plus/Plus Query 8894 GGACATCCCTTCACATTGGCACAAATGAGGGACTGAATGGTTGCGGTTTTCACGATGTCT 8953 ||||| || ||||| || || || ||||||||||| | || || || | ||| | Sbjct 19633 GGACAGCCTTTCACGTTATTGCAGATAAGGGACTGAATTGAGGCAGTGTTGATGATTTTA 19692 Query 8954 AAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTC 9013 || ||||| || || || || ||||| ||||||||||| || || || || || Sbjct 19693 AAGCCTACTTCTCCACCAAAAGTGCTAGGTTTCCAGTAGTGAGGAGAACATATAGGATTG 19752 Query 9014 GCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATG 9073 |||| || ||||||||||| ||||| || || || || | ||| ||||||| |||||| Sbjct 19753 CCCATCAGTCCTTTCAAGGAGAACGGCGCTCCGAGTTCTACCATGGTCTCACCAAAGATG 19812 Query 9074 GCACCGGGACGCGGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCG 9133 ||| | ||||| || ||||| || | | | ||| || || || | || || | ||| Sbjct 19813 GCATCTGGACGAGGCTTTTCCACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 19872 Query 9134 CCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTCACCT 9175 |||||||||||||| ||||| ||||| || |||||||| ||| Sbjct 19873 CCATAGAGGGCTTCTAACTCAGCAGCCATTTCCTTCTCTCCT 19914 Score = 156 bits (172), Expect = 6e-33 Identities = 169/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9739 GTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAGAACATCGCAGACC 9798 || || ||||| |||| ||||||||||| ||||| || | | | || |||||||| || Sbjct 21172 GTCTGGAACAAGCGCTCATCACCCCATTCTGGGTGCTCCTCTCTAAGCACATCGCACACT 21231 Query 9799 CTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGGCACTAAACCAAAC 9858 ||||||||||||| ||||| || ||||| |||||||| | ||| ||||| | || ||| Sbjct 21232 CTGTTGTGTTCTCGAAGCCAGATCGTGGCATACATCATCAGACCGGGCACCAGGCCGAAC 21291 Query 9859 ACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGCATACAGCATATGC 9918 || || | |||||| || |||||||| | || || | | || | || | ||| | | Sbjct 21292 ACCTCCTGCCCCACAGCGAAGCGCAGGTGTTCAGGGATGTGAGGGGGGTAGATCATCTCC 21351 Query 9919 ACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 ||||| || |||||||| ||||| || |||| ||| || ||||| Sbjct 21352 ACCTGAGTGTCTTTGACTGTGGGCGGGTACACTTCCCCATCAAT 21395 Score = 113 bits (124), Expect = 7e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 10121 TCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGTCCTAAA 10180 |||||||||||| || |||| | ||||| | ||||||||| ||| ||| | || Sbjct 22184 TCTTACCCCATGATTCAGTCCTTTGGTGAAGCCTGGTCCTCGCTTATGATCTGTCTTGAA 22243 Query 10181 AAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTGGGGATC 10240 ||| ||||| || ||||| || | || || |||||||||| || |||||||||||||| Sbjct 22244 AAACTGGTGGGTGAAGTGCTGGGCAAAGAACGCGAACATCAAATTTGTGCCCTGGGGATC 22303 Query 10241 GGGGATAAAGGTCCTCCGAATAAAAACTTTGTCCACAATCTGTGTTGAATCGGGCAG 10297 |||||||| | | | | || || ||| ||||||||| | ||||||| || || Sbjct 22304 AGGGATAAACTTTCCTCTTAGAAGAAATTTTTCCACAATCACTTTTGAATCAGGAAG 22360 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 |||||||| | || | ||||| ||||||||| || || ||||| |||| ||| ||| Sbjct 22784 TCACCTTTTATACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGAGCTCTGGTA 22843 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| ||||| ||||| ||||||||||| || |||||||| | || ||||| Sbjct 22844 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTGTACATTGTAAGTT 22903 Query 10507 GGGGGACTGTCAATCA 10522 || || |||||||||| Sbjct 22904 GGCGGGCTGTCAATCA 22919 Score = 87.8 bits (96), Expect = 3e-12 Identities = 192/286 (67%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 || ||||| || || |||| ||| |||| || |||| | || || | | | | Sbjct 20580 CCAGCAATTTGCCTGCTGAATGATGCAACAAACTGGGTAAGCCCATGTTCCAGTAATACA 20639 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||||| | || ||| ||| |||| | ||| | || |||| ||| Sbjct 20640 GAGTTGTTGTAGAGAAACTGTCTGTAGTTGTACTCCTGGTCTTCAATTTGAAAGGTGTCA 20699 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 || | || | ||||||| ||||||| || || ||||| || || || ||||||||||| Sbjct 20700 GGAAGAAGGGGATGCCAGTGGTAGAGTGTGTTAAACTCAGCAGCAATACGGTTCTGGTAT 20759 Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673 || || | ||| ||| || | ||| |||||||| | || | |||||| || || | Sbjct 20760 TGGAATTGTTGGT--TGAAAAGCAGCTCTGGGTCAAACTTGAGTTTGAAGTGATAGCCAC 20817 Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | || ||||| || || | | || | ||| ||||| ||||| || Sbjct 20818 TCAGGTGCTGTACGTAGTCTTCTATCACAATCTTAATAGTTTCTCC 20863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 721983164164800