Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq187028 114 3e-20 seq184519 114 3e-20 seq57523 113 1e-19 seq164519 109 1e-18 seq140467 105 2e-17 seq52001 104 5e-17 seq40632 100 7e-16 seq55580 93.3 1e-13 seq118833 91.5 3e-13 seq66368 89.7 1e-12 >seq187028 Length=2864 Score = 114 bits (126), Expect = 3e-20 Identities = 160/223 (72%), Gaps = 6/223 (3%) Strand=Plus/Plus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| ||| |||| ||||| ||||||||||| | ||||||||||| || || | Sbjct 880 GAAGTCTCAACACAGGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAGGGTAC 939 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGA---GACGCTGCTGGTCCGGAAAAATTC 199526 ||||||||||| ||||| || || ||||| | | | ||||| || ||| ||||| Sbjct 940 GCCCATCTTCCAGTTGCTTGCCTGCAAAGATCATCCGGCTTTGCTGATCAGGACGAATTC 999 Query 199527 CTTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 |||| || || ||||| ||| | | ||| || || | || ||| | || | Sbjct 1000 CTTCCTTATCTTGGATCTTGGCCTTTATGTTTTCTGTTGTATCCGATGGTTCAGCCTCAA 1059 Query 199587 ACG---TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | |||| ||||| ||||| || |||||||||||||| || Sbjct 1060 GAGTGATGATGGTCTTCCCCGTAAGGGTTTTCACAAAAATCTG 1102 >seq184519 Length=2203 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||||||| ||||| | ||||||||| | ||||||||||| || || | ||| Sbjct 1405 TCTCAACGCAAGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCC 1464 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 ||| ||||| ||||| || || ||||| || | ||||| || ||| ||||||||| Sbjct 1465 ATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 1524 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||| ||| || ||| || |||| ||| || || | | ||| Sbjct 1525 TTCTTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGAT 1584 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||| | || |||||||||||||| || Sbjct 1585 GGTCTTCCCCATAAGGGTTTTCACAAAAATCTG 1617 >seq57523 Length=7438 Score = 113 bits (124), Expect = 1e-19 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| | |||||| ||||| |||||| |||| | ||||||||||| || || | Sbjct 3318 AGTCTCAACATAAGGTGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAGACAGGGTATGT 3259 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| || || ||||| || | ||| | || ||| |||||||| | Sbjct 3258 CCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCGGATCAGGAGGAATTCCTTTT 3199 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || |||||||| ||| || || || ||| | ||| | || || ||| Sbjct 3198 TTATCTTGAATCTTGGCCTTTACATTATCAGTTGTATCTAAGGGTTCAGCCTCAAAAGTG 3139 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAAT 199623 | ||||| ||| | || |||||||||||||| Sbjct 3138 AAGGTCTTCCCCATAAGGGTTTTCACAAAAAT 3107 >seq164519 Length=6375 Score = 109 bits (120), Expect = 1e-18 Identities = 154/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| |||||||| || || ||||| ||||| | |||||||||| || || Sbjct 1272 AAGTCTCAACACAAGGTGAAGGGTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATG 1331 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 ||||||||| || ||||| || || ||||| || | ||||| || ||| ||||| | | Sbjct 1332 TCCATCTTCTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCTTCC 1391 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 | ||||| ||||| ||| || ||| | || ||| | ||| || || | || Sbjct 1392 TTA-TCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGT 1450 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATT 199624 ||| ||||| || || || |||||||||||| || Sbjct 1451 GATGGTCTT-CCTGTAAGGGTTTTCACAAAACTT 1483 >seq140467 Length=4940 Score = 105 bits (116), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || |||||||| || |||| ||||||||||| | ||| | |||||| Sbjct 4840 AGGACAAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTACGGCCATCT 4899 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 ||||||||||| || || |||||||| | ||||||||| || Sbjct 4900 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGG 4940 >seq52001 Length=6774 Score = 104 bits (114), Expect = 5e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 |||||| ||||| ||||| |||||||| |||| ||||||||| | || || | ||| || Sbjct 6672 CAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTC 6731 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||||||||||| ||||||||||| | | ||||||||| || Sbjct 6732 TTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTCAGG 6773 >seq40632 Length=8250 Score = 100 bits (110), Expect = 7e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 199411 AAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCT 199470 |||||||| ||||| || ||| | ||||||||||| | ||||||||||| |||||| | Sbjct 8032 AAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACA 7973 Query 199471 TCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTC 199530 || ||||||||| || || || || || || || | ||||| || ||| ||||||||| Sbjct 7972 TCTATCTTCCAGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 7913 >seq55580 Length=18577 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 199410 GAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCC 199469 ||||||||| |||||||| || | | |||||||| | |||||||||| | || | Sbjct 4115 GAAGTCTCAACACAAGGTGAAGCATAGGATCCTTTTGAATGTTGTAGTCA----AGGTAC 4060 Query 199470 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTT 199529 ||| |||||||| || || || | |||||| || | ||| | | ||| ||||| || Sbjct 4059 ATCCGTCTTCCAGTTGTTTGCCAGTGAAGATCAGTCTTTGCCGATGAGGAGGAATTCTTT 4000 Query 199530 CTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACG 199589 | || |||||||| ||| || ||| || || || | ||| || || | | Sbjct 3999 CCTTTTCTTGAATCTTGGCCTTTACATTTTCTACTGTATCCAAGGGTTCAACCTCGAGAG 3940 Query 199590 TGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| |||| || || || |||||||||||||| || Sbjct 3939 TGATGATCTTCCCTGTAAGGGTTTTCACAAAAATCTG 3903 >seq118833 Length=5824 Score = 91.5 bits (100), Expect = 3e-13 Identities = 149/215 (69%), Gaps = 11/215 (5%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| | |||||| ||||| |||||| |||| | ||||||||||| || || | Sbjct 906 AGTCTCAACATAAGGTGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAGACAGGGTATGT 847 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||| ||||| || || |||| | || ||| ||||||||| Sbjct 846 CCATCTTCCAGTTGCTTGCCAGCAAAGA----------CCAATCAGGAGGAATTCCTTCC 797 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || ||||| ||| || ||| | || |||| | ||| || || | ||| Sbjct 796 TTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTGACGGTTC-ACCTCAAGAGTG 738 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || | ||| || || || |||||||||||||| || Sbjct 737 ATGGCCTTCCCTGTAAGGGTTTTCACAAAAATCTG 703 >seq66368 Length=2842 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/202 (70%), Gaps = 4/202 (2%) Strand=Plus/Plus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAG--TCCTTCCA 199474 |||||| ||||| ||||| ||||| || |||| ||||||||| | |||| | |||| Sbjct 505 CAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGG--AAAGGATACTTCTG 562 Query 199475 TCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGC 199534 |||||||||||||| | || |||||| | | |||||| || || || || | | Sbjct 563 TCTTCCAGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGGATGCCCTTTTTG 622 Query 199535 TCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATC 199594 || || ||||| ||| || |||| |||||| | | || || |||| || || Sbjct 623 TCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTTATG 682 Query 199595 GTCTTACCCGTGAGAGTTTTCA 199616 ||||||||| | | || |||| Sbjct 683 GTCTTACCCTTCAAGGTCTTCA 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176008281362424