Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq52001 109 6e-19 seq66368 100 3e-16 seq55711 96.9 4e-15 seq22649 93.3 5e-14 >seq52001 Length=6774 Score = 109 bits (120), Expect = 6e-19 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| || |||| ||||| |||| || |||||| ||||| ||||||||||| Sbjct 6658 CCTCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 6717 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTC 46479 || ||||| |||| || ||||||||||||||||| ||||| | ||||||||| Sbjct 6718 AGGGTGCGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTC 6770 >seq66368 Length=2842 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || || | || ||||| |||| || ||| || ||||| ||||||||||| Sbjct 491 CCTCCCCTCAAGCACAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 550 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || | | ||| || |||||||||| || ||| ||||| | |||||| || | ||| Sbjct 551 AGGATACTTCTGTCTTCCAGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGG 610 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || ||||| |||||| ||||| || | | ||||| || | ||||| Sbjct 611 ATGCCCTTTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 670 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 |||| || ||||| || ||| ||| || || | ||||| |||||| Sbjct 671 TCCAGGGTTATGGTCTTACCCTTCAAGGTCTTCATGAAGATCTGCATT 718 >seq55711 Length=2414 Score = 96.9 bits (106), Expect = 4e-15 Identities = 160/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || | || ||| | |||| ||||| || ||| || ||||| || || || | Sbjct 2064 TGCCACCCCGTAGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTG 2123 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA-TCAAGCGCTGCTGGTCGGCC 46483 | ||||| | | || || ||||| ||||| || || | ||| ||||||||||| | Sbjct 2124 AGAGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGT 2183 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | || ||||||||| ||| || |||| || | | ||||| || | || Sbjct 2184 GGAATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCA 2243 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || ||||||||||| || || |||||||| ||||| Sbjct 2244 ACCTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq22649 Length=5672 Score = 93.3 bits (102), Expect = 5e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| || | ||| || ||||| || ||||| || ||||| || | || || Sbjct 768 ACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTCC 709 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 ||||| ||||| | | |||| |||||||||| | || | || ||||||| | | Sbjct 708 AGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGGAGGCCCTCCTTGGCTTGG 649 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 || || |||| || | | ||||| || | || || || | |||||||| ||| Sbjct 648 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTCTTG 589 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||||||| || || |||||||| ||||| Sbjct 588 CCCGTCAGGGTCTTCACAAAGATCTGCAT 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563875666741440