Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq55711 109 5e-19 seq89478 105 7e-18 seq98110 102 8e-17 seq52001 96.9 3e-15 seq22649 91.5 1e-13 seq178408 89.7 5e-13 seq66368 82.4 8e-11 >seq55711 Length=2414 Score = 109 bits (120), Expect = 5e-19 Identities = 155/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| || ||||| | || || ||| ||| Sbjct 2293 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATCACACTTGAGGTTGAGCCCAGT 2234 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| ||||||| ||||| ||||| ||||| | ||||| Sbjct 2233 GACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACCAG 2174 Query 38364 CAGCGGCTCATTTAC-GCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||||||||||| || | | || ||| || || || Sbjct 2173 CAGCGTCTGATTTTTTGCGGGCAAACAGCTGGAGGATGGCCATACTCTCTCAGATTATAA 2114 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| || || | || ||||||||||| || ||| Sbjct 2113 CATCCAGAAAGAGTCCACCCTGCATTTGGTACTTCGT 2077 >seq89478 Length=33119 Score = 105 bits (116), Expect = 7e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCAA 38315 || || || || | |||||| |||||||| |||| | | || || ||||| | | Sbjct 14373 GTGAAGACCCTGATGGGCAAGACCATCACACTCGAGGCCAAGCTCAGTGACAGTATTGAG 14432 Query 38316 ACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATT 38375 | | |||| ||||||| ||||||||||| || | ||||| |||| || ||| Sbjct 14433 AATGTCAAAGCTAAAATCCAAGACAAAGAGGGCATCTGACCTGACCAGCAGCATCTGATT 14492 Query 38376 TACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAA 38435 | | ||||||||||||||| || | |||| ||| ||||| |||||||| ||||| Sbjct 14493 TTTGTGGGCAAACAGCTGGAGGATGGTTGCACTCTCTGAGACTATAACATCCAGAAGGAG 14552 Query 38436 GCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 | || ||||| |||||||| | | |||| ||| || Sbjct 14553 TCCACTCTGCACTTGGTGCTTCCTCTGAGGGGCAGC 14588 >seq98110 Length=40326 Score = 102 bits (112), Expect = 8e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 ||||||| ||||| ||||| ||||| | ||||| ||||| || |||| ||||||||| Sbjct 16593 AAAATCCAAGACAAGGAGGGCATTCCACCTGACCAGCAGCGTCTGATTTCTGCGGGCAAA 16534 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCAT 38447 |||||||| || | ||||| ||| || || |||||||| || || | || ||||| Sbjct 16533 CAGCTGGAGGATGGCCGCACTCTCTCAGATTATAACATCCAGAAAGAGTCCACCCTGCAC 16474 Query 38448 TTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || ||| || | || ||| Sbjct 16473 TTGGTACTTCGTCTGCGGGGTGGC 16450 >seq52001 Length=6774 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| ||| || | || | ||| ||||| |||||||| |||| |||||||| |||| Sbjct 6770 GACCAGCAGAGGTTGATCTTCGCCGGCAAGCAGCTGGAAGACGGACGCACCCTGTCCGAC 6711 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||||||| ||||| | || ||||| |||| ||||| |||||||| || Sbjct 6710 TACAACATCCAGAAGGAGTCCACTCTGCACCTGGTCCTGCGCTTGAGAGGAGG 6658 >seq22649 Length=5672 Score = 91.5 bits (100), Expect = 1e-13 Identities = 150/215 (70%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || |||||||| |||||||| | || || ||| ||| Sbjct 560 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTTGAGCCCAGT 619 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | |||| ||||||| | ||| ||||| | || | ||||| Sbjct 620 GACACTATTGAGAATGTCAAAGCTAAAATCCAAGCCAAGGAGGGCCTCCCACCTGACCAG 679 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 |||| || |||| | ||||||||||||||| || | || || ||| ||||| ||| Sbjct 680 CAGCATCTGATTTCTGTGGGCAAACAGCTGGAGGATGGCCGTACTCTCTCAGACTATAAC 739 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| || || || |||| ||||| ||||| Sbjct 740 ATCCAGAAAGAGTGCACCGTGCACTTGGT-CTGCG 773 >seq178408 Length=1377 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| | || ||||| || || | | || |||| ||| |||| |||||| ||| Sbjct 936 ATGCAGACCTTTGTAAAGACCCTGATAGAAAAGACCACCACACTCGAGGTCGAGCCCAGT 995 Query 38304 GACAGCG-TGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || || | | |||| ||||| | ||||| ||||| | || | ||||| Sbjct 996 GACACTACTGAGAATG-TCAAAGCTAAAATGCAAGACAAGGAGGGCGTCCCTCCTGACCA 1054 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || |||| ||||||||||||||||| || | ||||| ||| |||| || Sbjct 1055 GCAGCGTCTGATTTTGGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCGGACTGTAA 1114 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTG 38453 |||||| || | | || ||||| |||||| Sbjct 1115 CATCCAGAAAGCGTCCACCCTGCACTTGGTG 1145 >seq66368 Length=2842 Score = 82.4 bits (90), Expect = 8e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || ||| | || || | | ||| || ||||| ||| | || || ||| ||| Sbjct 718 AATGCAGATCTTCATGAAGACCTTGAAGGGTAAGACCATAACCCTGGAGGTGGAGCCCAG 659 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | | | || | || |||| |||||| |||| || |||||| || | Sbjct 658 TGACACCATCGAGAATGTCAAGGCCAAGATCCAAGACAAAAAGGGCAT-CCCGCCTGATC 600 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||| || | || | | | |||| |||||||| ||| | | ||| |||||||| Sbjct 599 AGCAGAGGTTGATCTTCACCAGCAAGCAGCTGGAAGACAGAAGTATCCTTTCCGACTACA 540 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| || || | || ||||| |||| ||| | ||||| || || Sbjct 539 ACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTGTGCTTGAGGGGAGG 491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498966933396480