Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq164519 120 7e-22 seq66368 114 3e-20 seq184519 111 3e-19 seq57523 111 3e-19 seq55711 100 6e-16 seq118833 89.7 1e-12 seq55580 89.7 1e-12 seq98110 86.0 1e-11 >seq164519 Length=6375 Score = 120 bits (132), Expect = 7e-22 Identities = 158/215 (73%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||||||||| || |||||||||||||| ||||| || | || || Sbjct 1273 AGTCTCAACACAAGGTGAAGGGTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGT 1332 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 |||||||| || ||||| || || ||||| |||| ||| || || |||||||| |||| Sbjct 1333 CCATCTTCTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAAT-TCTTCC 1391 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || || || || || ||| || || || || || || | ||| || ||||| || Sbjct 1392 TTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGTG 1451 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTG 195137 | ||| ||||||| | ||||| || || ||||| Sbjct 1452 ATGGTC-TTCCTGTAAGGGTTTTCAC-AAAACTTG 1484 >seq66368 Length=2842 Score = 114 bits (126), Expect = 3e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| |||||||||||||| || || ||||| |||| ||| | || | ||||| Sbjct 509 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGATACTTCTGTCTTCC 568 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| | | |||||| | | || || || || || ||||| | ||||||||| Sbjct 569 AGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGGATGCCCTTTTTGTCTTGG 628 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTC 195108 || || |||||| ||||| |||||||| ||| ||||| || ||||| | ||| Sbjct 629 ATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTTATGGTC 685 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || |||| || || | ||| | |||||| Sbjct 686 TTACCCTTCAAGGTCTTCATGAAGATCTGCATT 718 >seq184519 Length=2203 Score = 111 bits (122), Expect = 3e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 |||||| ||||||||||||| | ||| |||||||| ||||| || | || || | || Sbjct 1405 TCTCAACGCAAGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCC 1464 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || || ||||| || || ||||| |||| ||| || || |||||||| ||||| || Sbjct 1465 ATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 1524 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 ||||| || || ||| || || || | || || || ||| || ||||| | | Sbjct 1525 TTCTTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGAT 1584 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| || | | ||||| || || | ||||| Sbjct 1585 GGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 1620 >seq57523 Length=7438 Score = 111 bits (122), Expect = 3e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||| | |||||||||||| ||||| ||||||| ||||| || | || || Sbjct 3319 GAGTCTCAACATAAGGTGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAGACAGGGTATG 3260 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| || ||||| || || ||||| |||| ||| | || |||||||| |||| Sbjct 3259 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCGGATCAGGAGGAATTCCTTT 3200 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 ||| |||||||| || ||| || || ||| | || || Sbjct 3199 TTTATCTTGAATCTTGGCCTTTACATTATCAGTTGTATC 3161 >seq55711 Length=2414 Score = 100 bits (110), Expect = 6e-16 Identities = 148/207 (71%), Gaps = 7/207 (3%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || ||||||||||| || || || ||||| | ||||| ||||| || ||||| Sbjct 2090 TGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCCTCCAGCTGT 2149 Query 194998 TTACCTGC-GAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || || || || || || ||||| || |||||||| || |||||||| ||||| Sbjct 2150 TTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTT 2209 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGTCTTTCC 195113 ||||| |||||||| ||||| ||| || || ||||| || | ||||| || Sbjct 2210 AGCTTTGACATTCTCAATAGTGTC---ACTGGGCTCAACCTCAAGTGTGATAGTCTTGCC 2266 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| || || || || | ||||| Sbjct 2267 CGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq118833 Length=5824 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/219 (69%), Gaps = 11/219 (5%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||| | |||||||||||| ||||| ||||||| ||||| || | || || Sbjct 907 GAGTCTCAACATAAGGTGAAGAGTAGACTCCCTTTGAATGTTGTAGTCAGACAGGGTATG 848 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| || ||||| || || |||| | || |||||||| ||||| Sbjct 847 TCCATCTTCCAGTTGCTTGCCAGCAAAGACCA----------ATCAGGAGGAATTCCTTC 798 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 || ||||| || || ||| || || || || || || | || | ||| ||||| || Sbjct 797 CTTATCTTGGATCTTGGCCTTTACATTTTCTATTGTATCTG-ACGGTTCACCTCAAGAGT 739 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | | ||| ||||| | ||||| || || | ||||| Sbjct 738 GATGGCCTTCCCTGTAAGGGTTTTCACAAAAATCTGCAT 700 >seq55580 Length=18577 Score = 89.7 bits (98), Expect = 1e-12 Identities = 151/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982 |||||||| ||||||||||| | | || |||||||| ||||| | |||| || | Sbjct 4113 AGTCTCAACACAAGGTGAAGCATAGGATCCTTTTGAATGTTGTA---GTCAAG-GTACAT 4058 Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042 || ||||| || || || || | |||||| |||| ||| | | |||||||| | ||| Sbjct 4057 CCGTCTTCCAGTTGTTTGCCAGTGAAGATCAGTCTTTGCCGATGAGGAGGAATTCTTTCC 3998 Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102 || |||||||| || ||| || || || | || ||| | ||| || || || || Sbjct 3997 TTTTCTTGAATCTTGGCCTTTACATTTTCTACTGTATCCAAGGGTTCAACCTCGAGAGTG 3938 Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCA 195139 | |||| ||||| | ||||| || || | |||| Sbjct 3937 ATGATCTTCCCTGTAAGGGTTTTCACAAAAATCTGCA 3901 >seq98110 Length=40326 Score = 86.0 bits (94), Expect = 1e-11 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || ||||||||||| || || || ||||| | ||||| | ||||| || ||||| Sbjct 16474 GTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTGCGGCCATCCTCCAGCTG 16533 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || | || || || || ||||| || |||||||| || |||||||| ||||| Sbjct 16534 TTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGATTTT 16593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106739879580824