Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq22649 118 7e-22 seq55711 107 1e-18 seq178408 102 5e-17 seq112477 95.1 8e-15 seq66368 93.3 3e-14 >seq22649 Length=5672 Score = 118 bits (130), Expect = 7e-22 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | |||| |||||||| ||||||||||| || || | || |||| ||| Sbjct 768 ACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTCC 709 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| || || | || || | |||||||| | || | ||||||||| | Sbjct 708 AGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGGAGGCCCTCCTTGGCTTGG 649 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || |||||| || || || | |||| || |||||| || | || ||||| | Sbjct 648 ATTTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTCT 591 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||||| || |||||||||||||||||||| Sbjct 590 TGCCCGTCAGGGTCTTCACAAAGATCTGCAT 560 >seq55711 Length=2414 Score = 107 bits (118), Expect = 1e-18 Identities = 153/212 (72%), Gaps = 5/212 (2%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||| |||||||| |||||||| || || || | | |||| ||| Sbjct 2084 ACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCCTCC 2143 Query 34833 AGCTGTTTTCCGGCAAATATT-AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 |||||||| || ||||| | | || || |||||||| | || | ||||||||||| Sbjct 2144 AGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 2203 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 || || |||||| || || || | |||| || |||||| || | || || || Sbjct 2204 GATTTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGTC 2261 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||| || |||||||||||||||||||| Sbjct 2262 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq178408 Length=1377 Score = 102 bits (112), Expect = 5e-17 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 34770 AAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCA 34829 || |||||||| | ||| ||||||| |||||| ||||||| || | || |||| Sbjct 1147 AACACCAAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAGAGTGCGGCCATCC 1088 Query 34830 TCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34889 ||||||||||| || || || || || || |||||||| | || || ||||||||||| Sbjct 1087 TCCAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGACGCCCTCCTTGTCT 1028 Query 34890 CTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 || || |||||| || || | | |||| || ||| || |||| || ||| Sbjct 1027 TGCATTTTAGCTTTGAC--ATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGGTGG 970 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | ||| | | || ||||| |||||| ||||||| Sbjct 969 TCTTTTCTATCAGGGTCTTTACAAAGGTCTGCAT 936 >seq112477 Length=10403 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 34793 TTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATAT 34852 |||||| ||||||||||| || || || |||| ||||||||||| | ||||| | Sbjct 1552 TTTCTGGATGTTATAGTCTGAGAGAGCACGGCCATCCTCCAGCTGTTTGTCCGCAAAACT 1611 Query 34853 TAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGC 34912 | || |||||||| || || ||||||||||| || || |||||| || | Sbjct 1612 CACACGCTGCTGGTCAGCGGGGACACCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTC 1669 Query 34913 T--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | |||| || |||||| || | || | ||| || ||| |||| ||||||||| Sbjct 1670 TCAATAGTGTCACTGGGCTCAACCTCAAGTGTGACGGTCTTGCCCATGAGGGTCTTCACA 1729 Query 34971 AAGATCTGCA 34980 ||| |||||| Sbjct 1730 AAGGTCTGCA 1739 >seq66368 Length=2842 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 ||||||||||| | || |||| ||| | ||| |||||||| ||||| ||||| ||| Sbjct 491 CCTCCCCTCAAGCACAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 550 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | | | || |||||||| || | || || || | | ||||| || |||| Sbjct 551 AGGATACTTCTGTCTTCCAGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGG 610 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAA 34932 | |||| ||||| ||||| ||||| || || || | |||| || ||| | Sbjct 611 ATGCCCTTTTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 668 Query 34933 CATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||||||||| || ||| | | ||||||| ||||||||||| Sbjct 669 CCTCCAGGGTTATGGTCTTACCCTTCAAGGTCTTCATGAAGATCTGCAT 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323870507332416