Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq88670 86.0 2e-12 >seq88670 Length=2616 Score = 86.0 bits (94), Expect = 2e-12 Identities = 184/272 (68%), Gaps = 10/272 (4%) Strand=Plus/Minus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGT--TTAT 1015 |||| | ||| || || || || ||||||| | || || || | ||| | | || | Sbjct 2601 TTCCTTCTGGGTGCTACGGAGGAGTAGCTCCACGTTCTGGCTTGGTGGCAATATACTTCT 2542 Query 1016 GATTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTT 1075 | ||| | || |||||||| || ||| ||| | ||| || || |||| ||||| | Sbjct 2541 CA--GATATAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATATTGGCGTTGTACT 2484 Query 1076 ATTTAATTTTAGC---GATAAGCGTTTTCATATTTCAAGAGGTGATAGGATTGCTCAGTT 1132 |||||||||| || || ||| ||| | | || ||||| | ||||| ||| | Sbjct 2483 ATTTAATTTTGGCAAAGAAAAG---TTTGAAGTCAAAAAGGGTGACCGAATTGCCCAGCT 2427 Query 1133 AATTTGTGAAAAGGCTGTTTTTCCATCCATTCAAATAGTGGATTCCTTAGAGGATTCGGA 1192 |||||||||| || | || |||| || || ||| | ||||| || |||| Sbjct 2426 CATTTGTGAAAGGGTTTTTAGTCCAGAAATAGAAGAAGTTCAAGTTTTAGATGACACGGA 2367 Query 1193 AAGGGGTTCTGCAGGATTTGGGTCTACCGGAA 1224 ||||||||| | ||| ||||| || ||||||| Sbjct 2366 AAGGGGTTCAGGAGGTTTTGGTTCCACCGGAA 2335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138363969904032