Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq167062 329 4e-85 seq91513 127 2e-24 seq108499 102 9e-17 >seq167062 Length=11021 Score = 329 bits (364), Expect = 4e-85 Identities = 669/986 (68%), Gaps = 13/986 (1%) Strand=Plus/Plus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 |||||| || |||| ||| || | ||| || | ||| | || ||| || ||||| || Sbjct 5016 CAGATGCTCATCCAAACACTGAATGGCAAAGAGGTCGATATCCATGTCAAACTTATTGGC 5075 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || | || ||||||| || ||| || | || || || || || Sbjct 5076 AAACAAGTGGTGC---TTGCGCAGCATCCAGTTCAAGTCACCTGCTCCAAAAACACACAC 5132 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 ||| |||| ||| || ||| ||||||| ||||| | || || || | || |||||||| Sbjct 5133 GGAGCGTACGTGGACACCGGTGCAAGGTGGGTAGGGGGCGCCCTTGGAAACATCACCTTC 5192 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 ||||||||||||| |||||||| || || || ||||||||||| ||||||| |||| Sbjct 5193 AAAGTACTGCCACTTGACAAACCTAGCAATTGCGTGCATGTCGGACATGTCGTACTTGTG 5252 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | | || || || | || || | ||| | || ||||| || | || Sbjct 5253 GCTTAAGGACAGCGAGCCTGGGACTTCAGGGATCCTCTGAATAGTAGCCCATAGATACTC 5312 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAAC-TCTCCGATTAACCTGTCCCGCA 160410 || |||||||| ||||| || | ||| ||||| || ||| || | || | | Sbjct 5313 ATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAATGTCTGGATTTTTTCATTCTCT-A 5371 Query 160411 GAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTA 160470 | |||| || || || | || ||||| || || || || || || | ||| Sbjct 5372 GCACGTACTGGACATAATTCCTACTAACCACAAAATAGGCACTACCTGAAAAGAGAGGTG 5431 Query 160471 TGGGTATAGGCGGCGTGTCTTT-GTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGC 160529 || | ||| || ||| ||| ||| || ||||| | || | ||| || || | Sbjct 5432 TGTCCAGAGGAGG-GTGCATTTTGTCAGTCCCTGTGTTTGTCAGCTTTCCATTAACAATT 5490 Query 160530 GCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTG 160589 | | |||| |||||||| | | || | | ||||| | || || ||||| || Sbjct 5491 GTATAATGCTTTTTCCACCTTTCTTTTTTATTGGACGGCATTCTCTCAGTTTCTAGGTTG 5550 Query 160590 TTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAG 160649 || | || | | | || || | | |||| || || ||||| || || | |||||| Sbjct 5551 TTTTCTCCCATTAACAACTTGAGTTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAG 5610 Query 160650 TCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTC 160709 || ||||||| | ||||||| ||||||||| | || |||| || || || | | Sbjct 5611 TCCATACCGCAAAGATTTATCAAGTACTTCCAGTCTGCACTCATTCTGTAGAGATCGCGC 5670 Query 160710 ATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTA 160769 || || || | ||| ||||| || || |||||||| || ||||| ||| |||| || | | Sbjct 5671 ATACAGTTGAGATCAGCCTGAACCCGACTCCAGGATGCATACACCACGCTCTCCAGCTCA 5730 Query 160770 CTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGC---CAGAAAGAAC 160826 |||||||| ||||| ||| |||||| || | || |||| |||||| || |||| || Sbjct 5731 CTGGCCACGAAGACATTACTGAAACAGGATGCAATGCCCATCACCGCAGCCAAAAAGGAC 5790 Query 160827 ATCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCC 160886 || | | |||| |||||| || | |||||| | |||||||||| ||||||||| Sbjct 5791 TCCT---CTGACTTTTTGTCCACATGAATGCAATAGAAGTTCTGAGGCATATAGATGGCC 5847 Query 160887 CTGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGA 160946 || || | ||| || | ||| || || || ||||| | ||| || || || ||||| ||| Sbjct 5848 CTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTATGGAATATGCTATTGGA 5907 Query 160947 AACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAA 161006 || || | ||| || ||| |||| | | ||||| ||| ||||||| ||| || Sbjct 5908 AATTCTGCCTCTTCTTTACTAAGGGGTTCTACAATATACTTGCGCCTCTTGATGAAAGAA 5967 Query 161007 TCACAATCCCGCGTCATGTTGATATA 161032 |||||| | |||||||| ||||| Sbjct 5968 GTACAATCACTAGTCATGTTTATATA 5993 >seq91513 Length=29810 Score = 127 bits (140), Expect = 2e-24 Identities = 202/290 (70%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 168153 AGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATG 168212 || || | ||| | | || |||| | ||| | | || || || |||||||||||| || Sbjct 13580 AGGGTGAGGCAGGCTATTGCAGAGAACTTCGCGGCACCAAAGGTATTGAAGAGGCACTTG 13521 Query 168213 AAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCC 168272 | || || || || | || |||||||||||| || || | ||||||| |||| ||| Sbjct 13520 TAACACCCCTCATCGTTCAAGGTGGTATTCCAGAAGGTAATAGTTGAGTGCTGGAGTCCC 13461 Query 168273 AACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCG 168332 | || || ||||||| ||| ||||| | ||| || || ||||| || || | |||| Sbjct 13460 AGCTCAGTGATGTTCATCTTATCCTTATAGGAAGGCTGGACCACAACCCCATGCTGCTCG 13401 Query 168333 CTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGA 168392 ||| |||| ||||||| || ||||| ||| | || |||||||| || || |||| Sbjct 13400 CTGTAGGTAACCATGTTTTCTGGGCTTACAGCCCTCATTTTCTGCCATGTCACAATCAAG 13341 Query 168393 ACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAG 168442 || | | || | ||| ||||||| | ||||| || | |||||| Sbjct 13340 ACATTCTGGGAAGTTTCCAGAGAACATCGTATGGAAGCAGGTGAGTTCAG 13291 >seq108499 Length=75296 Score = 102 bits (112), Expect = 9e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| || |||| |||| || |||| |||||| | |||||| || || | | || | Sbjct 20131 AGATACTTCGCTAGCTCACTGGGAGAGTTATAATCTTCAACATGAATGAAGGAATCTGCT 20190 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || |||||||| |||| || || || || | ||| || || || | || || Sbjct 20191 GGAATATAATTTTCATAGTTTTCCCTAGATGGCCCCAGAACAATAGGAACCGAACCAGCC 20250 Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCT 176411 | || | ||||| |||||||| |||||| || |||| |||||||||||||| | Sbjct 20251 AGAAAAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAA 20310 Query 176412 AAATAGAACTTACA 176425 | ||| || || || Sbjct 20311 AGATAAAATTTGCA 20324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 575827582230720