Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq40632 107 3e-18 seq164519 96.9 6e-15 seq184519 95.1 2e-14 >seq40632 Length=8250 Score = 107 bits (118), Expect = 3e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 193152 ACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCT 193211 || ||||| | ||| ||| || ||| || ||||| || || || | ||| || Sbjct 8022 ACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCTATCTTCC 7963 Query 193212 AATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGT 193271 | |||||| || |||||||| | ||| || ||||||||||| |||||||| || ||||| Sbjct 7962 AGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGG 7903 Query 193272 ATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTA 193331 || |||| |||| |||| || | ||| ||| ||| | || ||||| ||||| || Sbjct 7902 ATCTTGGCCTTTACATTTTCTATTGCATCTGAAAGTTCAGCCTCAAGAGTGATAGTCTTC 7843 Query 193332 CCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 | || || ||||| | || || |||||||| Sbjct 7842 CTTGCAAGGGTTTTAATGAAAATCTGCATTTT 7811 >seq164519 Length=6375 Score = 96.9 bits (106), Expect = 6e-15 Identities = 143/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||| |||||| ||| || ||||| || | || ||| |||| ||| || || Sbjct 1294 GTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGTCCATCTTCTAGTTGCTTGCCA 1353 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || | ||| || ||||||||||| ||| |||| ||||| || || |||| ||| Sbjct 1354 GCAAAGATCAGTCTTTGCTGATCAGGAGGAATT-CTTCCTTATCCTGGATCTTGGCCTTT 1412 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | |||| || ||||| | | ||||| || ||||| || || || ||||| || ||| Sbjct 1413 ACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGTGATGGTCTT-CCTGTAAGGGTT 1471 Query 193344 TTTACAAATATTTGCATTTT 193363 || ||||| || |||| || Sbjct 1472 TTCACAAAACTTGGCATCTT 1491 >seq184519 Length=2203 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 193164 GTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCG 193223 |||||||| || ||| || ||||| || | || | ||| || | ||| || || Sbjct 1424 GTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCCATCCTCCAGTTGCTTGCCA 1483 Query 193224 GCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTT 193283 ||||| || | ||| || ||||||||||| |||||||| || ||||| || |||| ||| Sbjct 1484 GCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGGATCTTGGCCTTT 1543 Query 193284 ATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTT 193343 | |||| | ||||| || ||||| || |||| || || || || | || ||| Sbjct 1544 ACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGATGGTCTTCCCCATAAGGGTT 1603 Query 193344 TTTACAAATATTTGCATTTT 193363 || ||||| || ||||| || Sbjct 1604 TTCACAAAAATCTGCATCTT 1623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897485423207040