Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq184519 118 2e-21 seq40632 114 3e-20 seq164519 89.7 1e-12 seq57523 87.8 4e-12 >seq184519 Length=2203 Score = 118 bits (130), Expect = 2e-21 Identities = 149/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 192339 AGTAGCCTC-TTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTAC 192397 ||||||||| ||| || || || || ||||| | || ||| |||| |||| ||| || | Sbjct 1423 AGTAGCCTCCTTTTGA-ATGTTGTAGTCAGACAGGGTACGTCCATCCTCCAGTTGCTTGC 1481 Query 192398 CAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTT 192457 |||||||||| | ||| || |||||||| || |||||||| || ||||| || || | Sbjct 1482 CAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGGATCTTGGCCT 1541 Query 192458 TTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATG 192517 ||||||| | | | ||||||| ||| || || |||| ||||| || || | | | Sbjct 1542 TTACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGATGGTCTTCCCCATAAGGG 1601 Query 192518 TTTTAATAAATATCTGCATTTT 192539 |||| | ||| |||||||| || Sbjct 1602 TTTTCACAAAAATCTGCATCTT 1623 >seq40632 Length=8250 Score = 114 bits (126), Expect = 3e-20 Identities = 166/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 |||||| | ||| | || || | ||| | | ||| ||| ||| || || || || |||| Sbjct 8041 ACCACCACAAAGTCTCAACACAAGATGAAGAATAGACTCCTTTTGA-ATGTTGTAGTCAG 7983 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || || | | ||| |||| |||||| |||||||| || | ||| || |||||||| | Sbjct 7982 ACAAAGTACATCTATCTTCCAGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAG 7923 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | |||||||| || ||||| || || |||||||| ||| | |||||| ||| Sbjct 7922 GAATTCCTTCCTTTTCTTGGATCTTGGCCTTTACATTTTCTATTGCATCTGAAAGTTCAG 7863 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 | || ||||| || || || | | | |||||||| || ||||||||||| Sbjct 7862 CCTCAAGAGTGATAGTCTTCCTTGCAAGGGTTTTAATGAAAATCTGCATTTT 7811 >seq164519 Length=6375 Score = 89.7 bits (98), Expect = 1e-12 Identities = 134/188 (71%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 192340 GTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCA 192399 |||| |||||| || || || ||||| | || || |||| || | ||| || ||| Sbjct 1294 GTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGTCCATCTTCTAGTTGCTTGCCA 1353 Query 192400 GCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTT 192459 |||||||| | ||| || |||||||| || ||| |||| ||||| || || || ||| Sbjct 1354 GCAAAGATCAGTCTTTGCTGATCAGGAGGAATT-CTTCCTTATCCTGGATCTTGGCCTTT 1412 Query 192460 ACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTT 192519 ||||| ||| | |||| | | ||| || || ||||| ||||| || || || | ||| Sbjct 1413 ACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGTGATGGTCTT-CCTGTAAGGGTT 1471 Query 192520 TTAATAAA 192527 || | ||| Sbjct 1472 TTCACAAA 1479 >seq57523 Length=7438 Score = 87.8 bits (96), Expect = 4e-12 Identities = 142/202 (70%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 192339 AGTAGCCTCT-TTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTAC 192397 ||||| ||| || || || || || ||||| | || || |||| |||| ||| || | Sbjct 3298 AGTAGACTCCCTTTGA-ATGTTGTAGTCAGACAGGGTATGTCCATCTTCCAGTTGCTTGC 3240 Query 192398 CAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTT 192457 |||||||||| | ||| || ||||||| || ||||||| ||||||||| || || | Sbjct 3239 CAGCAAAGATCAGTCTTTGCGGATCAGGAGGAATTCCTTTTTTATCTTGAATCTTGGCCT 3180 Query 192458 TTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATG 192517 |||||||| | | |||| | | ||| | || | ||| | ||| || || | | | Sbjct 3179 TTACATTATCAGTTGTATCTAAGGGTTCAGCCTCAAAAGTGAAGGTCTTCCCCATAAGGG 3120 Query 192518 TTTTAATAAATATCTGCATTTT 192539 |||| | ||| |||| ||| || Sbjct 3119 TTTTCACAAAAATCTCCATCTT 3098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982047180097200