Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq50693 210 3e-48 seq190386 170 3e-36 seq155161 168 1e-35 seq175166 145 1e-28 seq121482 118 2e-20 seq177824 116 6e-20 seq121341 96.9 5e-14 seq47165 87.8 3e-11 >seq50693 Length=6589 Score = 210 bits (232), Expect = 3e-48 Identities = 193/244 (79%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| ||||||| ||||| ||| Sbjct 648 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCGCCCGGCA 589 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| ||| || ||||||||| Sbjct 588 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 529 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct 528 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCA 469 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| |||||||||| Sbjct 468 TGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGCACCTTGT 409 Query 1485710 AAAC 1485713 | || Sbjct 408 ACAC 405 >seq190386 Length=4631 Score = 170 bits (188), Expect = 3e-36 Identities = 184/244 (75%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| ||||| || ||||| || |||||| ||| || ||| Sbjct 3048 TGTACTTGGTGACTGCCTTGGTGCCCTCGGACACGGCATGTTTGGCCAATTCACCCGGCA 3107 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || ||| || || ||||||||||| |||| ||| || ||||||||| Sbjct 3108 GCAGCAAGCGGACAGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAAT 3167 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| |||||| | | ||||| |||| ||||||||||| || ||||||| Sbjct 3168 GCGCCAGGCGGGAAGCCTCGCCGGCAATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCA 3227 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 | || ||| | ||| ||||||||| ||||||||| |||||||| || ||||||| Sbjct 3228 TAATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGTACCTGCTTCAGTACCTTGT 3287 Query 1485710 AAAC 1485713 | || Sbjct 3288 ACAC 3291 >seq155161 Length=9434 Score = 168 bits (186), Expect = 1e-35 Identities = 182/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||||||||| ||||| || || |||||| ||||||| || || ||| Sbjct 5 TGTACTTGGTGACGGCCTTGGTGCCCTCGGACACCGCGTGCTTGGCCAGCTCCCCCGGCA 64 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | |||||||||||| ||||||||||| |||| | ||| || ||||||||| Sbjct 65 GCAGCAGGCGCACGGCCGTCTGGATCTCCCGGGAGGAGATGGTTGAGCGCTTGTTGTAAT 124 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||||||||| |||||| ||||||| || | ||||| | || || || |||| Sbjct 125 GCGCCAGGCGCGACGCCTCGCCCGCGATGCGCTCAAAGATGTCAGTAACGAAGGAATTCA 184 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| ||||||||| |||||||||||||||||| || || || | Sbjct 185 TGATATTCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACCTGCTTCAGTACTTTAT 244 Query 1485710 A 1485710 | Sbjct 245 A 245 >seq175166 Length=1121 Score = 145 bits (160), Expect = 1e-28 Identities = 136/173 (79%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 1485541 ACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCGG 1485600 ||||| ||||||||||| |||| ||| || ||||||||| ||||||||||| Sbjct 1 ACGGCCGTCTGGATCTCCCGGGACGTGATGGTCGAGCGCTTGTTGTAATGCGCCAGGCGG 60 Query 1485601 CCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATC 1485660 ||||||| | ||||||| |||| ||||||||||| |||||||||||||| ||| Sbjct 61 GAGGCCTCGCCGGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTCATGATGCCCATG 120 Query 1485661 GATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAAAC 1485713 | ||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 121 GCCTTGGACGAGATGCCCGTGTCGGGATGCACCTGCTTGAGCACCTTGTACAC 173 >seq121482 Length=21546 Score = 118 bits (130), Expect = 2e-20 Identities = 165/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||||||||| ||||| ||||| || ||||||||| ||||||| || || ||| Sbjct 19032 TGTACTTGGTGACGGCTTTGGTGCCCTCAGACACGGCGTGCTTGGCCAGCTCCCCAGGCA 18973 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGG-TGCCGATCGTGTTGCGCTTGTTAGTG 1485588 | ||| |||||||| ||||||| || |||| || | | ||| || | ||| Sbjct 18972 GCAGCAGACGCACGGCTGTCTGGACTTCCCGGGATGTCAGTGTGGTTCGGCCCG--AGTA 18915 Query 1485589 C-GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTT 1485647 | | ||||| ||| |||||||| | | || || | || ||||| ||||| ||||| Sbjct 18914 CTGAGCCAGCCGGGCGGCCTCGCCAGCCAGCCGCTCAAACACATCGTTTACAAATGAGTT 18855 Query 1485648 CATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 |||||| ||| | || ||||| || | ||| ||||||||||| Sbjct 18854 CATGATGCTCATGGCCTTAGAAGAGATACCGATGTCAGGGTGCACCTG 18807 >seq177824 Length=1324 Score = 116 bits (128), Expect = 6e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 1485576 GCGCTTGTTAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTT 1485635 ||||||||| |||||| |||| ||||||| | |||| || |||| |||||||| Sbjct 5 GCGCTTGTTGTAATGCGCCAAGCGGGAGGCCTCGCCGGCGATACGCTCGAAGATGTCGTT 64 Query 1485636 GACAAACGAGTTCATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 ||| |||||||||||||| ||| | ||| ||||||||| |||||||||||| || Sbjct 65 GACGAACGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCCGTGTCGGGGTGCACTTG 124 Query 1485696 CTTGAGCACCTTGTAAACAAAG 1485717 |||||||||||| || ||| || Sbjct 125 CTTGAGCACCTTATACACATAG 146 >seq121341 Length=12433 Score = 96.9 bits (106), Expect = 5e-14 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 429061 AGCGATTCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAACT 429120 |||| || ||||||||||| |||||| | || || ||| ||||||||||| || ||| Sbjct 10638 AGCGGTTGAAGGGCAAGGAAGGCCGGGTGCGAGGGAATCTGATGGGCAAGCGAGTGGACT 10697 Query 429121 TTACGGCGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGTGC 429180 | |||| ||| | ||||||| ||||||||| | || ||||||| |||| ||||||| Sbjct 10698 TCTCGGCTCGCACTGTCATCACCCCCGACCCCAACCTCTCCATTGACCAGGTTGGCGTGC 10757 Query 429181 C 429181 | Sbjct 10758 C 10758 >seq47165 Length=8799 Score = 87.8 bits (96), Expect = 3e-11 Identities = 129/181 (71%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||| | |||||| | ||||| || ||||||||| ||||||| || || | | Sbjct 227 TGTACTTGGTGCCAGCCTTGATGCCCTCCGATACGGCGTGCTTGGCCAGCTCCTCGGGGA 286 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||||||||| || | | ||| || | ||| || |||||||| | Sbjct 287 CCAGCAGGCGCACGGTCTTCAGCACCTC-CGAGATGTGATGGTCCAGCGCTTGTAA---A 342 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 ||||||||||| | ||| || |||||| || | ||||||||||| || | |||| Sbjct 343 GCGCCAGGCGGGACGTCTCACTGGCGATGCATTCAAAAATGTCGTTGACGAAATAATTCA 402 Query 1485650 T 1485650 | Sbjct 403 T 403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7895729725670808